RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 CD37P11049 281 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF44P15621 663 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 GABRR1P24046 479 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 HTR1DP28221 377 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 PTGFRP43088 359 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 ETV1P50549 477 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 GTF2A1P52655 376 aaPredicted RBP2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 TAS2R43P59537 309 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 RPS11P62280 158 aaKnown RBP eCLIP2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 BDH1Q02338 343 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 PRB3Q04118 309 aaPredicted RBP2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 AESQ08117 197 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 ST3GAL4Q11206 333 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 GPR176Q14439 515 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 HERPUD1Q15011 391 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 P2RY14Q15391 338 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 C17orf58Q2M2W7 97 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 MPV17LQ2QL34 196 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 ANKRD55Q3KP44 614 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 Q3ZCU0 254 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 RNF212Q495C1 297 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 Q499Y3 187 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 YIF1BQ5BJH7 314 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 OGFRL1Q5TC84 451 aaPredicted RBP2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR2G6Q5TZ20 316 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 XAF1Q6GPH4 301 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 LAIR2Q6ISS4 152 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 CCBE1Q6UXH8 406 aaPredicted RBP2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 LHFPL4Q7Z7J7 247 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 LINC00596Q86U02 117 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 LYPD6Q86Y78 171 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 DYNAPQ8N1N2 210 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 C8orf31Q8N9H6 132 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF565Q8N9K5 539 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 KLHL30-AS1Q8NEE0 82 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR51A2Q8NGJ7 313 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR4P4Q8NGL7 312 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 OR4C13Q8NGP0 309 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 CNIH3Q8TBE1 160 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 ZNF596Q8TC21 504 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 TSEN15Q8WW01 171 aaKnown RBP2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 C17orf50Q8WW18 174 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 CYGBQ8WWM9 190 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 RGP1Q92546 391 aaPredicted RBP2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 TMEM106AQ96A25 262 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 MRPS24Q96EL2 167 aaKnown RBP2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 COQ2Q96H96 371 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 TMEM80Q96HE8 168 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 PGLYRP3Q96LB9 341 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 SPACA5Q96QH8 159 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 CHST6Q9GZX3 395 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 PPA2Q9H2U2 334 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 DCLRE1BQ9H816 532 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 TNFRSF19Q9NS68 423 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 FKBP14Q9NWM8 211 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 PAK1IP1Q9NWT1 392 aaPredicted RBP2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 DPM3Q9P2X0 92 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 FOXJ3Q9UPW0 622 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 VSIG4Q9Y279 399 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 GSTK1Q9Y2Q3 226 aa2.66□□□□□ -1.98
CKS1BP3-201ENST00000600888 LEUTXA8MZ59 168 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 LY6LH3BQJ8 138 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 BUB1B-PAK6H3BSN5 160 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 M0QZK8 103 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 SIRPB1O00241 398 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 CHST1O43916 411 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 SC5DO75845 299 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 MMP23AO75900 390 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 CLIC3O95833 236 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 FCGR3AP08637 254 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 DNAH10OSP0CZ25 163 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 MYL12AP19105 171 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 GZMHP20718 246 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 COX7A1P24310 79 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 CDK2P24941 298 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 BRS3P32247 399 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF93P35789 620 aaPredicted RBP2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 CEACAM3P40198 252 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 ARHGDIBP52566 201 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 PRRX1P54821 245 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 WNT4P56705 351 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 RBM11P57052 281 aaKnown RBP2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 PPP3R1P63098 170 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 EMX1Q04741 257 aaPredicted RBP2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 RIPK1Q13546 671 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 EBI3Q14213 229 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 EDDM3AQ14507 147 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 RCN1Q15293 331 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 RSU1Q15404 277 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 SSX2Q16385 188 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 LRRC36Q1X8D7 754 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 HLA-DRB5Q30154 266 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 SLC22A6Q4U2R8 563 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 PAN3Q58A45 887 aaKnown RBP2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 DDI2Q5TDH0 399 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 RSBN1Q5VWQ0 802 aaPredicted RBP2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 UNQ9370/PRO34162Q6UXP9 181 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 ZNF600Q6ZNG1 722 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 Q6ZRG5 221 aa2.65□□□□□ -1.99
CKS1BP3-201ENST00000600888 TRAPPC6BQ86SZ2 158 aa2.65□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms