RNA–Protein interactions for RNA: ENST00000599833.1

SHKBP1-221, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 761 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-221ENST00000599833 PRELID3BQ9Y3B1 194 aa15.25■□□□□ 0.03
SHKBP1-221ENST00000599833 TSSC4Q9Y5U2 329 aaPredicted RBP15.25■□□□□ 0.03
SHKBP1-221ENST00000599833 WSB1Q9Y6I7 421 aa15.25■□□□□ 0.03
SHKBP1-221ENST00000599833 TCRBV4S1A1TA0A5B7 111 aa15.24■□□□□ 0.03
SHKBP1-221ENST00000599833 CSF1P09603 554 aa15.24■□□□□ 0.03
SHKBP1-221ENST00000599833 IDO2Q6ZQW0 420 aa15.24■□□□□ 0.03
SHKBP1-221ENST00000599833 PUSL1Q8N0Z8 303 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-221ENST00000599833 ARRDC1Q8N5I2 433 aa15.24■□□□□ 0.03
SHKBP1-221ENST00000599833 OR4S2Q8NH73 311 aa15.24■□□□□ 0.03
SHKBP1-221ENST00000599833 TRIM63Q969Q1 353 aa15.24■□□□□ 0.03
SHKBP1-221ENST00000599833 FAM103A1Q9BTL3 118 aaKnown RBP15.24■□□□□ 0.03
SHKBP1-221ENST00000599833 TRAV41A0A0B4J266 112 aa15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 FABP12A6NFH5 140 aa15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 RBFOX2O43251 390 aaKnown RBP eCLIP15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 RPLP1P05386 114 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 IL6RP08887 468 aaPredicted RBP15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 TAS2R19P59542 299 aa15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 RPL23AP62750 156 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 FOXE3Q13461 319 aa15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 RNASE10Q5GAN6 216 aaKnown RBP15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 FAAP20Q6NZ36 180 aa15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 STEAP1BQ6NZ63 245 aa15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 TEX38Q6PEX7 206 aa15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 ETV3LQ6ZN32 361 aa15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 VKORC1L1Q8N0U8 176 aa15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 COMMD1Q8N668 190 aa15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 KLK15Q9H2R5 256 aa15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 NDUFA13Q9P0J0 144 aa15.23■□□□□ 0.03
SHKBP1-221ENST00000599833 ANKRD20A5PA0PJZ0 165 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 GPR31O00270 319 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 OPN1MWP04001 364 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 RLN1P04808 185 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 ELANEP08246 267 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 OPN1MW2P0DN77 364 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 OPN1MW3P0DN78 364 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 VDAC1P21796 283 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 ETV6P41212 452 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 KIR2DS2P43631 304 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 TSPAN5P62079 268 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 SLC35B1P78383 322 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 CBX3Q13185 183 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 PLGLAQ15195 96 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 POU2AF1Q16633 256 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 PRSS8Q16651 343 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 ZNF585BQ52M93 769 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 SPAG16Q8N0X2 631 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 OR6Q1Q8NGQ2 317 aa15.22■□□□□ 0.03
SHKBP1-221ENST00000599833 A0A1W2PRX2 142 aa15.21■□□□□ 0.03
SHKBP1-221ENST00000599833 FXYD3Q14802 87 aa15.21■□□□□ 0.03
SHKBP1-221ENST00000599833 OR4C16Q8NGL9 310 aa15.21■□□□□ 0.03
SHKBP1-221ENST00000599833 OR51H1Q8NH63 302 aa15.21■□□□□ 0.03
SHKBP1-221ENST00000599833 FAM110DQ8TAY7 271 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-221ENST00000599833 ARPC1AQ92747 370 aa15.21■□□□□ 0.03
SHKBP1-221ENST00000599833 GON7Q9BXV9 100 aa15.21■□□□□ 0.03
SHKBP1-221ENST00000599833 ZNF430Q9H8G1 570 aaPredicted RBP15.21■□□□□ 0.03
SHKBP1-221ENST00000599833 NOTCH3Q9UM47 2321 aa15.21■□□□□ 0.02
SHKBP1-221ENST00000599833 A0A1B0GW64 132 aa15.2■□□□□ 0.02
SHKBP1-221ENST00000599833 A6NHS1 94 aa15.2■□□□□ 0.02
SHKBP1-221ENST00000599833 RAB3DO95716 219 aa15.2■□□□□ 0.02
SHKBP1-221ENST00000599833 ECSCRQ19T08 205 aa15.2■□□□□ 0.02
SHKBP1-221ENST00000599833 VMA21Q3ZAQ7 101 aa15.2■□□□□ 0.02
SHKBP1-221ENST00000599833 AKIRIN2Q53H80 203 aa15.2■□□□□ 0.02
SHKBP1-221ENST00000599833 LFNGQ8NES3 379 aa15.2■□□□□ 0.02
SHKBP1-221ENST00000599833 TMEM167AQ8TBQ9 72 aa15.2■□□□□ 0.02
SHKBP1-221ENST00000599833 ZFP57Q9NU63 452 aa15.2■□□□□ 0.02
SHKBP1-221ENST00000599833 E7EUB6 86 aa15.19■□□□□ 0.02
SHKBP1-221ENST00000599833 KBTBD11O94819 623 aa15.19■□□□□ 0.02
SHKBP1-221ENST00000599833 S1PR2O95136 353 aa15.19■□□□□ 0.02
SHKBP1-221ENST00000599833 RND3P61587 244 aa15.19■□□□□ 0.02
SHKBP1-221ENST00000599833 CATR1Q13166 79 aa15.19■□□□□ 0.02
SHKBP1-221ENST00000599833 KLF9Q13886 244 aaPredicted RBP15.19■□□□□ 0.02
SHKBP1-221ENST00000599833 PHLDA2Q53GA4 152 aa15.19■□□□□ 0.02
SHKBP1-221ENST00000599833 SLC38A6Q8IZM9 456 aa15.19■□□□□ 0.02
SHKBP1-221ENST00000599833 OR13C8Q8NGS7 320 aa15.19■□□□□ 0.02
SHKBP1-221ENST00000599833 BORCS5Q969J3 196 aa15.19■□□□□ 0.02
SHKBP1-221ENST00000599833 RHOVQ96L33 236 aa15.19■□□□□ 0.02
SHKBP1-221ENST00000599833 SRRQ9GZT4 340 aa15.19■□□□□ 0.02
SHKBP1-221ENST00000599833 CGB1A6NKQ9 187 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 OR2A4O95047 310 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 HPRT1P00492 218 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 IGKV1-39P01597 117 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 IGKV1D-39P04432 117 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 AKAIN1P0CW23 69 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 F2RP25116 425 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 PTBP1P26599 531 aaKnown RBP eCLIP15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 TAS2R31P59538 309 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 C10orf55Q5SWW7 151 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 TBC1D26Q86UD7 250 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 TCTEX1D1Q8N7M0 179 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 TERB2Q8NHR7 220 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 GRPEL2Q8TAA5 225 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 CASTOR1Q8WTX7 329 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 R3HDM4Q96D70 268 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 OR2A7Q96R45 310 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 SDHCQ99643 169 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 THAP7Q9BT49 309 aaPredicted RBP15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 PLEKHA2Q9HB19 425 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 SLC2A9Q9NRM0 540 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 SLC2A8Q9NY64 477 aa15.18■□□□□ 0.02
SHKBP1-221ENST00000599833 BET1LQ9NYM9 111 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms