RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 K7EIL1 84 aa14.3□□□□□ -0.12
SHKBP1-202ENST00000593764 PRSS3P35030 304 aa14.3□□□□□ -0.12
SHKBP1-202ENST00000593764 DHRS11Q6UWP2 260 aa14.3□□□□□ -0.12
SHKBP1-202ENST00000593764 TCTEX1D2Q8WW35 142 aa14.3□□□□□ -0.12
SHKBP1-202ENST00000593764 ACOT12Q8WYK0 555 aa14.3□□□□□ -0.12
SHKBP1-202ENST00000593764 RHOVQ96L33 236 aa14.3□□□□□ -0.12
SHKBP1-202ENST00000593764 TMEM68Q96MH6 324 aa14.3□□□□□ -0.12
SHKBP1-202ENST00000593764 DCUN1D5Q9BTE7 237 aa14.3□□□□□ -0.12
SHKBP1-202ENST00000593764 SLA2Q9H6Q3 261 aa14.3□□□□□ -0.12
SHKBP1-202ENST00000593764 MSGN1A6NI15 193 aa14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 HPGDSO60760 199 aa14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 LGALS1P09382 135 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 OR8U8P0C7N1 319 aa14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 ELK1P19419 428 aa14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 RFX2P48378 723 aa14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 TPPP2P59282 170 aa14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 LYSMD2Q8IV50 215 aa14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 VKORC1L1Q8N0U8 176 aa14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 POC5Q8NA72 575 aa14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 ZBTB34Q8NCN2 500 aa14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 GPX8Q8TED1 209 aa14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 SLC5A7Q9GZV3 580 aa14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 ZNF430Q9H8G1 570 aaPredicted RBP14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 SCOCQ9UIL1 159 aa14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 MRPS7Q9Y2R9 242 aaKnown RBP14.29□□□□□ -0.12
SHKBP1-202ENST00000593764 H3BUA1 57 aa14.28□□□□□ -0.12
SHKBP1-202ENST00000593764 TNFSF12O43508 249 aa14.28□□□□□ -0.12
SHKBP1-202ENST00000593764 BRI3O95415 125 aa14.28□□□□□ -0.12
SHKBP1-202ENST00000593764 IGHV3-11P01762 117 aa14.28□□□□□ -0.12
SHKBP1-202ENST00000593764 TRGV3P03979 118 aa14.28□□□□□ -0.12
SHKBP1-202ENST00000593764 CD40LGP29965 261 aa14.28□□□□□ -0.12
SHKBP1-202ENST00000593764 FXYD4P59646 89 aa14.28□□□□□ -0.12
SHKBP1-202ENST00000593764 DYRK1AQ13627 763 aa14.28□□□□□ -0.12
SHKBP1-202ENST00000593764 TNXAQ16473 311 aa14.28□□□□□ -0.12
SHKBP1-202ENST00000593764 OR4S2Q8NH73 311 aa14.28□□□□□ -0.12
SHKBP1-202ENST00000593764 DPF1Q92782 380 aa14.28□□□□□ -0.12
SHKBP1-202ENST00000593764 EHFQ9NZC4 300 aa14.28□□□□□ -0.12
SHKBP1-202ENST00000593764 SMIM31A0A1B0GVY4 71 aa14.27□□□□□ -0.13
SHKBP1-202ENST00000593764 RAMP3O60896 148 aa14.27□□□□□ -0.13
SHKBP1-202ENST00000593764 PMP2P02689 132 aa14.27□□□□□ -0.13
SHKBP1-202ENST00000593764 APELAP0DMC3 54 aa14.27□□□□□ -0.13
SHKBP1-202ENST00000593764 GNRHRP30968 328 aa14.27□□□□□ -0.13
SHKBP1-202ENST00000593764 C9orf66Q5T8R8 295 aa14.27□□□□□ -0.13
SHKBP1-202ENST00000593764 ZNF818PQ6ZRF7 136 aa14.27□□□□□ -0.13
SHKBP1-202ENST00000593764 PUSL1Q8N0Z8 303 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-202ENST00000593764 SRSF12Q8WXF0 261 aaKnown RBP14.27□□□□□ -0.13
SHKBP1-202ENST00000593764 DCUN1D4Q92564 292 aa14.27□□□□□ -0.13
SHKBP1-202ENST00000593764 ZNF355PQ9NSJ1 428 aa14.27□□□□□ -0.13
SHKBP1-202ENST00000593764 IGHV4OR15-8A0A075B7B6 117 aa14.26□□□□□ -0.13
SHKBP1-202ENST00000593764 A0A087WW49 117 aa14.26□□□□□ -0.13
SHKBP1-202ENST00000593764 SEC14L6B5MCN3 397 aa14.26□□□□□ -0.13
SHKBP1-202ENST00000593764 LINC01619G3V211 115 aa14.26□□□□□ -0.13
SHKBP1-202ENST00000593764 ZNF182P17025 639 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-202ENST00000593764 KIR2DS2P43631 304 aa14.26□□□□□ -0.13
SHKBP1-202ENST00000593764 SLURP1P55000 103 aa14.26□□□□□ -0.13
SHKBP1-202ENST00000593764 GPR141Q7Z602 305 aa14.26□□□□□ -0.13
SHKBP1-202ENST00000593764 MMD2Q8IY49 270 aa14.26□□□□□ -0.13
SHKBP1-202ENST00000593764 DLX4Q92988 240 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-202ENST00000593764 TINAGL1Q9GZM7 467 aaPredicted RBP14.26□□□□□ -0.13
SHKBP1-202ENST00000593764 SULT1C2O00338 296 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 RBMXL2O75526 392 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 OR2A4O95047 310 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 HSPB1P04792 205 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 HRH1P35367 487 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 TAS2R46P59540 309 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 C10orf55Q5SWW7 151 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 MZT2AQ6P582 158 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 TMEM17Q86X19 198 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 SNX29P2Q8IUI4 249 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 SPAG16Q8N0X2 631 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 ADAD2Q8NCV1 583 aaKnown RBP14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 OR5H2Q8NGV7 314 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 TMEM167AQ8TBQ9 72 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 MOB3AQ96BX8 217 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 OR2A7Q96R45 310 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 ZNF2Q9BSG1 426 aaPredicted RBP14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 SCPEP1Q9HB40 452 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 ADAM30Q9UKF2 790 aa14.25□□□□□ -0.13
SHKBP1-202ENST00000593764 E7EUB6 86 aa14.24□□□□□ -0.13
SHKBP1-202ENST00000593764 RBFOX2O43251 390 aaKnown RBP eCLIP14.24□□□□□ -0.13
SHKBP1-202ENST00000593764 CREBL2O60519 120 aaPredicted RBP14.24□□□□□ -0.13
SHKBP1-202ENST00000593764 KBTBD11O94819 623 aa14.24□□□□□ -0.13
SHKBP1-202ENST00000593764 HLA-DMAP28067 261 aa14.24□□□□□ -0.13
SHKBP1-202ENST00000593764 HERV-K104P61576 105 aa14.24□□□□□ -0.13
SHKBP1-202ENST00000593764 DGCR2P98153 550 aa14.24□□□□□ -0.13
SHKBP1-202ENST00000593764 AP3S1Q92572 193 aa14.24□□□□□ -0.13
SHKBP1-202ENST00000593764 PHB2Q99623 299 aa14.24□□□□□ -0.13
SHKBP1-202ENST00000593764 COA4Q9NYJ1 87 aa14.24□□□□□ -0.13
SHKBP1-202ENST00000593764 A0A0G2JLM5 398 aa14.23□□□□□ -0.13
SHKBP1-202ENST00000593764 A0A1B0GW64 132 aa14.23□□□□□ -0.13
SHKBP1-202ENST00000593764 OVOL1O14753 267 aa14.23□□□□□ -0.13
SHKBP1-202ENST00000593764 ACTL6BO94805 426 aa14.23□□□□□ -0.13
SHKBP1-202ENST00000593764 HRASP01112 189 aa14.23□□□□□ -0.13
SHKBP1-202ENST00000593764 OR9G9P0C7N8 305 aa14.23□□□□□ -0.13
SHKBP1-202ENST00000593764 DEFA5Q01523 94 aa14.23□□□□□ -0.13
SHKBP1-202ENST00000593764 SPCS2Q15005 226 aa14.23□□□□□ -0.13
SHKBP1-202ENST00000593764 SSX9Q7RTT3 188 aa14.23□□□□□ -0.13
SHKBP1-202ENST00000593764 OR6F1Q8NGZ6 308 aa14.23□□□□□ -0.13
SHKBP1-202ENST00000593764 VSTM2AQ8TAG5 236 aa14.23□□□□□ -0.13
SHKBP1-202ENST00000593764 SPIN2AQ99865 258 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms