RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 DNAH2Q9P225 4427 aa6.45□□□□□ -1.38
SMAD4-215ENST00000592911 TRAV8-7A0A075B6U6 113 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 TRBV7-1A0A0A6YYK4 115 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 NPIPB5A8MRT5 1133 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 M0R1X1 148 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 TSPAN4O14817 238 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 HIST1H1BP16401 226 aaKnown RBP6.44□□□□□ -1.38
SMAD4-215ENST00000592911 RPS11P62280 158 aaKnown RBP eCLIP6.44□□□□□ -1.38
SMAD4-215ENST00000592911 EWSR1Q01844 656 aaKnown RBP eCLIP6.44□□□□□ -1.38
SMAD4-215ENST00000592911 PJVKQ0ZLH3 352 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 IRF3Q14653 427 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 DEFB135Q30KP9 77 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 XP32Q5T750 250 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 AMIGO2Q86SJ2 522 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 UXS1Q8NBZ7 420 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 VSTM2AQ8TAG5 236 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 C11orf45Q8TAV5 145 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 ANAPC16Q96DE5 110 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 PGLYRP3Q96LB9 341 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 CXorf58Q96LI9 332 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 ATP6V0BQ99437 205 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 TSC22D3Q99576 134 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 PARP12Q9H0J9 701 aaKnown RBP6.44□□□□□ -1.38
SMAD4-215ENST00000592911 CHMP1AQ9HD42 196 aaPredicted RBP6.44□□□□□ -1.38
SMAD4-215ENST00000592911 C12orf4Q9NQ89 552 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 PLEKHJ1Q9NW61 149 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 BLOC1S6Q9UL45 172 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 UFC1Q9Y3C8 167 aa6.44□□□□□ -1.38
SMAD4-215ENST00000592911 ANKRD65E5RJM6 399 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 RBMXL2O75526 392 aaKnown RBP6.43□□□□□ -1.38
SMAD4-215ENST00000592911 MYL12AP19105 171 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 MAS1LP35410 378 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 ARL3P36405 182 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 RASSF2P50749 326 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 CDK10Q15131 360 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 TNXAQ16473 311 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 MRGPRG-AS1Q2M3A8 158 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 LAMTOR1Q6IAA8 161 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 NR2C2APQ86WQ0 139 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 SETD9Q8NE22 299 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 OR4A4PQ8NGN8 299 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 PHYHIPQ92561 330 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 EEF1AKMT3Q96AZ1 226 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 SLC7A6OSQ96CW6 309 aaPredicted RBP6.43□□□□□ -1.38
SMAD4-215ENST00000592911 DERL3Q96Q80 235 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 URM1Q9BTM9 101 aaKnown RBP6.43□□□□□ -1.38
SMAD4-215ENST00000592911 FAAP24Q9BTP7 215 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 Q9N2K0 584 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 MLXQ9UH92 298 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 DIMT1Q9UNQ2 313 aaKnown RBP6.43□□□□□ -1.38
SMAD4-215ENST00000592911 DNAH17Q9UFH2 4485 aa6.43□□□□□ -1.38
SMAD4-215ENST00000592911 OR4C46A6NHA9 309 aa6.42□□□□□ -1.38
SMAD4-215ENST00000592911 CRYGCP07315 174 aa6.42□□□□□ -1.38
SMAD4-215ENST00000592911 FGF2P09038 288 aa6.42□□□□□ -1.38
SMAD4-215ENST00000592911 CD37P11049 281 aa6.42□□□□□ -1.38
SMAD4-215ENST00000592911 PSMD7P51665 324 aa6.42□□□□□ -1.38
SMAD4-215ENST00000592911 C1orf100Q5SVJ3 147 aa6.42□□□□□ -1.38
SMAD4-215ENST00000592911 XAF1Q6GPH4 301 aa6.42□□□□□ -1.38
SMAD4-215ENST00000592911 C6orf201Q7Z4U5 140 aa6.42□□□□□ -1.38
SMAD4-215ENST00000592911 FAM89BQ8N5H3 189 aa6.42□□□□□ -1.38
SMAD4-215ENST00000592911 CABLES2Q9BTV7 478 aa6.42□□□□□ -1.38
SMAD4-215ENST00000592911 MAP6D1Q9H9H5 199 aa6.42□□□□□ -1.38
SMAD4-215ENST00000592911 RDH8Q9NYR8 311 aa6.42□□□□□ -1.38
SMAD4-215ENST00000592911 SRRM4A7MD48 611 aaKnown RBP6.41□□□□□ -1.38
SMAD4-215ENST00000592911 MPTX1A8MV57 137 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 TMEM14DPA8MWL7 114 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 TRDCB7Z8K6 153 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 EI24O14681 340 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 SLC22A5O76082 557 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 SCAF4O95104 1147 aaKnown RBP6.41□□□□□ -1.38
SMAD4-215ENST00000592911 OR2C1O95371 312 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 CD5P06127 495 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 CDK1P06493 297 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 TMEM41BQ5BJD5 291 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 BTNL8Q6UX41 500 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 OR13C5Q8NGS8 318 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 ACOT12Q8WYK0 555 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 CCDC140Q96MF4 163 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 FYTTD1Q96QD9 318 aaKnown RBP6.41□□□□□ -1.38
SMAD4-215ENST00000592911 RARRES2Q99969 163 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 SRSF8Q9BRL6 282 aaKnown RBP6.41□□□□□ -1.38
SMAD4-215ENST00000592911 ZNF436Q9C0F3 470 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-215ENST00000592911 CSTL1Q9H114 145 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 ZNF430Q9H8G1 570 aaPredicted RBP6.41□□□□□ -1.38
SMAD4-215ENST00000592911 SLC2A9Q9NRM0 540 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 SDHAF2Q9NX18 166 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 THYN1Q9P016 225 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 OR1A1Q9P1Q5 309 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 APLNQ9ULZ1 77 aa6.41□□□□□ -1.38
SMAD4-215ENST00000592911 DYNC1H1Q14204 4646 aaKnown RBP6.41□□□□□ -1.38
SMAD4-215ENST00000592911 TRBV6-7A0A0A0MS04 114 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 ZNF320A2RRD8 509 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 DPPA5A6NC42 116 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 PPP5D1E7EU14 171 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 CYB5BO43169 146 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 OR2J3O76001 311 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 ZNF735P0CB33 412 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 CELP19835 753 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 HTR2CP28335 458 aa6.4□□□□□ -1.38
SMAD4-215ENST00000592911 DUTP33316 252 aaKnown RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms