RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 ATG5Q9H1Y0 275 aa10.4□□□□□ -0.74
HDAC5-208ENST00000588419 ACOT13Q9NPJ3 140 aa10.4□□□□□ -0.74
HDAC5-208ENST00000588419 ELF5Q9UKW6 265 aaPredicted RBP10.4□□□□□ -0.74
HDAC5-208ENST00000588419 CSMD3Q7Z407 3707 aa10.4□□□□□ -0.74
HDAC5-208ENST00000588419 FAM223BA6NKX1 122 aa10.39□□□□□ -0.75
HDAC5-208ENST00000588419 CREBL2O60519 120 aaPredicted RBP10.39□□□□□ -0.75
HDAC5-208ENST00000588419 IGHV3-23P01764 117 aa10.39□□□□□ -0.75
HDAC5-208ENST00000588419 HLA-AP01891 365 aaKnown RBP10.39□□□□□ -0.75
HDAC5-208ENST00000588419 ZNF45Q02386 682 aa10.39□□□□□ -0.75
HDAC5-208ENST00000588419 CDK10Q15131 360 aa10.39□□□□□ -0.75
HDAC5-208ENST00000588419 C19orf35Q6ZS72 473 aa10.39□□□□□ -0.75
HDAC5-208ENST00000588419 FAM223AQ8IWN6 122 aa10.39□□□□□ -0.75
HDAC5-208ENST00000588419 H1FOOQ8IZA3 346 aaPredicted RBP10.39□□□□□ -0.75
HDAC5-208ENST00000588419 DEFB125Q8N687 156 aa10.39□□□□□ -0.75
HDAC5-208ENST00000588419 OSR1Q8TAX0 266 aaPredicted RBP10.39□□□□□ -0.75
HDAC5-208ENST00000588419 DDB2Q92466 427 aa10.39□□□□□ -0.75
HDAC5-208ENST00000588419 THAP7Q9BT49 309 aaPredicted RBP10.39□□□□□ -0.75
HDAC5-208ENST00000588419 DUSP21Q9H596 190 aa10.39□□□□□ -0.75
HDAC5-208ENST00000588419 SRD5A3Q9H8P0 318 aa10.39□□□□□ -0.75
HDAC5-208ENST00000588419 SLC2A8Q9NY64 477 aa10.39□□□□□ -0.75
HDAC5-208ENST00000588419 S4R3C0 116 aa10.39□□□□□ -0.75
HDAC5-208ENST00000588419 DPPA5A6NC42 116 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 METTL21EPA6NDL7 271 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 HMX3A6NHT5 357 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 IFITM5A6NNB3 132 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 RAB27BO00194 218 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 JTBO76095 146 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 CD7P09564 240 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 RAB3BP20337 219 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 NFYAP23511 347 aaPredicted RBP10.38□□□□□ -0.75
HDAC5-208ENST00000588419 SSX1Q16384 188 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 C15orf32Q32M92 178 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 ZNF367Q7RTV3 350 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 PRSS48Q7RTY5 328 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 MMD2Q8IY49 270 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 VKORC1L1Q8N0U8 176 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 ZNF645Q8N7E2 425 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 NRG4Q8WWG1 115 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 FYTTD1Q96QD9 318 aaKnown RBP10.38□□□□□ -0.75
HDAC5-208ENST00000588419 SPIN2AQ99865 258 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 SPIN2BQ9BPZ2 258 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 ST6GALNAC5Q9BVH7 336 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 SIGLEC8Q9NYZ4 499 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 MRPS7Q9Y2R9 242 aaKnown RBP10.38□□□□□ -0.75
HDAC5-208ENST00000588419 EPPK1P58107 5090 aaKnown RBP10.38□□□□□ -0.75
HDAC5-208ENST00000588419 DNAH1Q9P2D7 4330 aa10.38□□□□□ -0.75
HDAC5-208ENST00000588419 HYDINQ4G0P3 5121 aa10.37□□□□□ -0.75
HDAC5-208ENST00000588419 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.37□□□□□ -0.75
HDAC5-208ENST00000588419 AIREO43918 545 aa10.37□□□□□ -0.75
HDAC5-208ENST00000588419 BRI3O95415 125 aa10.37□□□□□ -0.75
HDAC5-208ENST00000588419 CD36P16671 472 aa10.37□□□□□ -0.75
HDAC5-208ENST00000588419 RAB6AP20340 208 aa10.37□□□□□ -0.75
HDAC5-208ENST00000588419 CRHBPP24387 322 aa10.37□□□□□ -0.75
HDAC5-208ENST00000588419 OR2K2Q8NGT1 345 aa10.37□□□□□ -0.75
HDAC5-208ENST00000588419 NUDCD2Q8WVJ2 157 aa10.37□□□□□ -0.75
HDAC5-208ENST00000588419 TCTEX1D2Q8WW35 142 aa10.37□□□□□ -0.75
HDAC5-208ENST00000588419 CACNG8Q8WXS5 425 aa10.37□□□□□ -0.75
HDAC5-208ENST00000588419 WDR89Q96FK6 387 aaPredicted RBP10.37□□□□□ -0.75
HDAC5-208ENST00000588419 CNBD2Q96M20 576 aa10.37□□□□□ -0.75
HDAC5-208ENST00000588419 HIPK2Q9H2X6 1198 aa10.37□□□□□ -0.75
HDAC5-208ENST00000588419 SPATA2Q9UM82 520 aa10.37□□□□□ -0.75
HDAC5-208ENST00000588419 PRELID3BQ9Y3B1 194 aa10.37□□□□□ -0.75
HDAC5-208ENST00000588419 DIRAS3O95661 229 aa10.36□□□□□ -0.75
HDAC5-208ENST00000588419 RPL30P62888 115 aaKnown RBP10.36□□□□□ -0.75
HDAC5-208ENST00000588419 TBCEQ15813 527 aaPredicted RBP10.36□□□□□ -0.75
HDAC5-208ENST00000588419 C22orf42Q6IC83 251 aa10.36□□□□□ -0.75
HDAC5-208ENST00000588419 SSX9Q7RTT3 188 aa10.36□□□□□ -0.75
HDAC5-208ENST00000588419 SLC25A42Q86VD7 318 aa10.36□□□□□ -0.75
HDAC5-208ENST00000588419 NECAP1Q8NC96 275 aa10.36□□□□□ -0.75
HDAC5-208ENST00000588419 FBXL7Q9UJT9 491 aa10.36□□□□□ -0.75
HDAC5-208ENST00000588419 RBMX2Q9Y388 322 aaKnown RBP10.36□□□□□ -0.75
HDAC5-208ENST00000588419 TRAV1-2A0A0B4J238 106 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 C2orf70A6NJV1 201 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 OR11H12B2RN74 326 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 OR2C1O95371 312 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 REG1AP05451 166 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 DTYMKP23919 212 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 ARL3P36405 182 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 RPL27AP46776 148 aaKnown RBP10.35□□□□□ -0.75
HDAC5-208ENST00000588419 CDNFQ49AH0 187 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 CLEC19AQ6UXS0 136 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 TTC9CQ8N5M4 171 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 OR4S2Q8NH73 311 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 KCTD12Q96CX2 325 aaKnown RBP10.35□□□□□ -0.75
HDAC5-208ENST00000588419 ZC4H2Q9NQZ6 224 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 NDUFB11Q9NX14 153 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 TAS2R8Q9NYW2 309 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 OR2W1Q9Y3N9 320 aa10.35□□□□□ -0.75
HDAC5-208ENST00000588419 TRBV9A0A0B4J1U6 114 aa10.34□□□□□ -0.75
HDAC5-208ENST00000588419 IGKV1D-13A0A0B4J2D9 117 aa10.34□□□□□ -0.75
HDAC5-208ENST00000588419 ZNF320A2RRD8 509 aa10.34□□□□□ -0.75
HDAC5-208ENST00000588419 RBMY1BA6NDE4 496 aaKnown RBP10.34□□□□□ -0.75
HDAC5-208ENST00000588419 RBMY1EA6NEQ0 496 aaKnown RBP10.34□□□□□ -0.75
HDAC5-208ENST00000588419 TMEM235A6NFC5 223 aa10.34□□□□□ -0.75
HDAC5-208ENST00000588419 ERICH4A6NGS2 130 aa10.34□□□□□ -0.75
HDAC5-208ENST00000588419 ZNF785A8K8V0 405 aa10.34□□□□□ -0.75
HDAC5-208ENST00000588419 TNFSF12O43508 249 aa10.34□□□□□ -0.75
HDAC5-208ENST00000588419 GGCTO75223 188 aaKnown RBP10.34□□□□□ -0.75
HDAC5-208ENST00000588419 KBTBD11O94819 623 aa10.34□□□□□ -0.75
HDAC5-208ENST00000588419 RBMY1DP0C7P1 496 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms