RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 PAQR9Q6ZVX9 377 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 BPIFA4PQ86YQ2 179 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 LRRC75A-AS1Q8N1F1 130 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 TEX29Q8N6K0 151 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 ZNF611Q8N823 705 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 LINC01555Q8NAE3 123 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 OR8B12Q8NGG6 310 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 OR51A4Q8NGJ6 313 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 OR4A16Q8NH70 328 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 OR10G6Q8NH81 332 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 C16orf52Q8NHV5 167 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 KCNG3Q8TAE7 436 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 ZNRF4Q8WWF5 429 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 TMEM54Q969K7 222 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 C10orf35Q96D05 121 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 ADTRPQ96IZ2 230 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 VSTM2LQ96N03 204 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 SPAG8Q99932 426 aaPredicted RBP5.09□□□□□ -1.59
SMAD4-203ENST00000585448 WFDC6Q9BQY6 131 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 CLEC7AQ9BXN2 247 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 SCRT2Q9NQ03 307 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 NXT1Q9UKK6 140 aaKnown RBP5.09□□□□□ -1.59
SMAD4-203ENST00000585448 RCL1Q9Y2P8 373 aaKnown RBP5.09□□□□□ -1.59
SMAD4-203ENST00000585448 IER3IP1Q9Y5U9 82 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 TMEM14AQ9Y6G1 99 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 PIKFYVEQ9Y2I7 2098 aa5.09□□□□□ -1.59
SMAD4-203ENST00000585448 MCM3APO60318 1980 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 SCN8AQ9UQD0 1980 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 HELZP42694 1942 aaKnown RBP5.08□□□□□ -1.6
SMAD4-203ENST00000585448 PIGBOS1A0A0B4J2F0 54 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 SMIM28A0A1B0GU29 152 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 A0A1W2PRE2 83 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 MED19A0JLT2 244 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-203ENST00000585448 CRYM-AS1A6NIL9 109 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 LRRC30A6NM36 301 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 TMEM262E9PQX1 116 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 FCN1O00602 326 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 CRXO43186 299 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-203ENST00000585448 CA1P00915 261 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-203ENST00000585448 IGLV3-25P01717 112 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 CRYGBP07316 175 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 SP9P0CG40 484 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 HIST1H1CP16403 213 aaKnown RBP5.08□□□□□ -1.6
SMAD4-203ENST00000585448 UQCRFS1P47985 274 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 PGFP49763 221 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 FUT6P51993 359 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 ZNF133P52736 654 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-203ENST00000585448 FOXG1P55316 489 aaPredicted RBP5.08□□□□□ -1.6
SMAD4-203ENST00000585448 RPL8P62917 257 aaKnown RBP5.08□□□□□ -1.6
SMAD4-203ENST00000585448 SLC35B1P78383 322 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 SP4Q02446 784 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 MFAP5Q13361 173 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 CLEC12BQ2HXU8 276 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 KIAA1644Q3SXP7 199 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 TMEM196Q5HYL7 178 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 FAM78AQ5JUQ0 283 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 TMEM215Q68D42 235 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 LCN10Q6JVE6 187 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 WDR5BQ86VZ2 330 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 MEX3DQ86XN8 651 aaKnown RBP5.08□□□□□ -1.6
SMAD4-203ENST00000585448 OR4X2Q8NGF9 303 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 OR1L1Q8NH94 360 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 C8orf46Q8TAG6 207 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 SCGB1C1Q8TD33 95 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 UBE2E3Q969T4 207 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 FAM131CQ96AQ9 280 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 MSI2Q96DH6 328 aaKnown RBP5.08□□□□□ -1.6
SMAD4-203ENST00000585448 TNFRSF13CQ96RJ3 184 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 VGLL1Q99990 258 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 TXNDC17Q9BRA2 123 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 TMEM70Q9BUB7 260 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 SFXN3Q9BWM7 321 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 C11orf1Q9H5F2 150 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 ZNF665Q9H7R5 613 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 UBTD1Q9HAC8 227 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 SAP30LQ9HAJ7 183 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 GNB4Q9HAV0 340 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 SH2D2AQ9NP31 389 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 IL36BQ9NZH7 164 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 CLCF1Q9UBD9 225 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 KCNS2Q9ULS6 477 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 LINC00312Q9Y6C7 94 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 MYO10Q9HD67 2058 aa5.08□□□□□ -1.6
SMAD4-203ENST00000585448 BRWD3Q6RI45 1802 aa5.07□□□□□ -1.6
SMAD4-203ENST00000585448 MBLAC1A4D2B0 266 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-203ENST00000585448 C21orf140B9A014 251 aa5.07□□□□□ -1.6
SMAD4-203ENST00000585448 F5H5K5 113 aa5.07□□□□□ -1.6
SMAD4-203ENST00000585448 HLA-DQA1P01909 254 aa5.07□□□□□ -1.6
SMAD4-203ENST00000585448 ATP1B2P14415 290 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-203ENST00000585448 IGFBP3P17936 291 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-203ENST00000585448 GATA2P23769 480 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-203ENST00000585448 CCL23P55773 120 aa5.07□□□□□ -1.6
SMAD4-203ENST00000585448 RPS4XP62701 263 aaKnown RBP5.07□□□□□ -1.6
SMAD4-203ENST00000585448 ZNF90Q03938 601 aa5.07□□□□□ -1.6
SMAD4-203ENST00000585448 PSG5Q15238 335 aa5.07□□□□□ -1.6
SMAD4-203ENST00000585448 OR1Q1Q15612 314 aa5.07□□□□□ -1.6
SMAD4-203ENST00000585448 TNXAQ16473 311 aa5.07□□□□□ -1.6
SMAD4-203ENST00000585448 PRR30Q53SZ7 412 aaPredicted RBP5.07□□□□□ -1.6
SMAD4-203ENST00000585448 SLC25A53Q5H9E4 307 aa5.07□□□□□ -1.6
SMAD4-203ENST00000585448 ZNF766Q5HY98 468 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms