RNA–Protein interactions for RNA: ENST00000580646.5

GGA3-209, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-209ENST00000580646 RBPMSQ93062 196 aaKnown RBP7.88□□□□□ -1.15
GGA3-209ENST00000580646 C5orf30Q96GV9 206 aa7.88□□□□□ -1.15
GGA3-209ENST00000580646 EAF1Q96JC9 268 aaPredicted RBP7.88□□□□□ -1.15
GGA3-209ENST00000580646 HSD17B10Q99714 261 aaKnown RBP7.88□□□□□ -1.15
GGA3-209ENST00000580646 ZNF2Q9BSG1 426 aaPredicted RBP7.88□□□□□ -1.15
GGA3-209ENST00000580646 THAP7Q9BT49 309 aaPredicted RBP7.88□□□□□ -1.15
GGA3-209ENST00000580646 SRRQ9GZT4 340 aa7.88□□□□□ -1.15
GGA3-209ENST00000580646 RNF150Q9ULK6 438 aa7.88□□□□□ -1.15
GGA3-209ENST00000580646 SIGLEC9Q9Y336 463 aa7.88□□□□□ -1.15
GGA3-209ENST00000580646 MOB4Q9Y3A3 225 aa7.88□□□□□ -1.15
GGA3-209ENST00000580646 WASHC3Q9Y3C0 194 aa7.88□□□□□ -1.15
GGA3-209ENST00000580646 CBY1Q9Y3M2 126 aa7.88□□□□□ -1.15
GGA3-209ENST00000580646 KMT2CQ8NEZ4 4911 aaKnown RBP7.87□□□□□ -1.15
GGA3-209ENST00000580646 M0R1X1 148 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 APOA2P02652 100 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 CD3DP04234 171 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 IFNA6P05013 189 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 S100A8P05109 93 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 S100A9P06702 114 aaKnown RBP7.87□□□□□ -1.15
GGA3-209ENST00000580646 FCER2P06734 321 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 AKAIN1P0CW23 69 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 NUP62P37198 522 aaPredicted RBP7.87□□□□□ -1.15
GGA3-209ENST00000580646 ECI1P42126 302 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 AP3S2P59780 193 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 TSPAN5P62079 268 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 ASAH1Q13510 395 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 HES1Q14469 280 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 PYDC2Q56P42 97 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 RNASE12Q5GAN4 147 aaKnown RBP7.87□□□□□ -1.15
GGA3-209ENST00000580646 C11orf88Q6PI97 169 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 TMEM219Q86XT9 240 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 ZNF383Q8NA42 475 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 BVESQ8NE79 360 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 OR4C13Q8NGP0 309 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 DDB2Q92466 427 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 TCEAL7Q9BRU2 100 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 BIN3Q9NQY0 253 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 MCUBQ9NWR8 336 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 SLC2A8Q9NY64 477 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 UBQLN2Q9UHD9 624 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 BOLA1Q9Y3E2 137 aa7.87□□□□□ -1.15
GGA3-209ENST00000580646 PRKDCP78527 4128 aaKnown RBP7.87□□□□□ -1.15
GGA3-209ENST00000580646 IGHV3-72A0A0B4J1Y9 119 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 NDUFA3O95167 84 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 SPDEFO95238 335 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 RAB3DO95716 219 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 ZNF735P0CB33 412 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 CD24P25063 80 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 GNRHRP30968 328 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 FAUP35544 74 aaKnown RBP7.86□□□□□ -1.15
GGA3-209ENST00000580646 BAK1Q16611 211 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 FBLN7Q53RD9 439 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 AADACL3Q5VUY0 350 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 FAM71E2Q8N5Q1 922 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 TCTEX1D1Q8N7M0 179 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 C5orf56Q8N8D9 126 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 NPBQ8NG41 125 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 OR2T6Q8NHC8 308 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 SECTM1Q8WVN6 248 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 PRRT1Q99946 306 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 TINAGL1Q9GZM7 467 aaPredicted RBP7.86□□□□□ -1.15
GGA3-209ENST00000580646 PRSS22Q9GZN4 317 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 SLC5A7Q9GZV3 580 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 FXYD6Q9H0Q3 95 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 RANGRFQ9HD47 186 aaPredicted RBP7.86□□□□□ -1.15
GGA3-209ENST00000580646 CCL28Q9NRJ3 127 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 FAM212BQ9NTI7 297 aaPredicted RBP7.86□□□□□ -1.15
GGA3-209ENST00000580646 LIN7CQ9NUP9 197 aaKnown RBP7.86□□□□□ -1.15
GGA3-209ENST00000580646 HSPB11Q9Y547 144 aa7.86□□□□□ -1.15
GGA3-209ENST00000580646 DBX1A6NMT0 343 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 LINC00473A8K010 186 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 DISC1C4P0D8 188 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 H7C2Y5 167 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 M0QYG6 137 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 GPR31O00270 319 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 RBFOX2O43251 390 aaKnown RBP eCLIP7.85□□□□□ -1.15
GGA3-209ENST00000580646 SCO1O75880 301 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 AMY1AP04745 511 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 AMY2AP04746 511 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 FABP1P07148 127 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 VAMP1P23763 118 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 S100PP25815 95 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 KIR2DS2P43631 304 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 LGALS7P47929 136 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 FXYD4P59646 89 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 CATR1Q13166 79 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 KLF9Q13886 244 aaPredicted RBP7.85□□□□□ -1.15
GGA3-209ENST00000580646 SURF2Q15527 256 aaPredicted RBP7.85□□□□□ -1.15
GGA3-209ENST00000580646 RTL8BQ17RB0 113 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 TMEM177Q53S58 311 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 Q5BKY6 102 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 MZT2BQ6NZ67 158 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 TEX261Q6UWH6 196 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 ZNF818PQ6ZRF7 136 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 KCTD9Q7L273 389 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 CMTM1Q8IZ96 169 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 TOMM5Q8N4H5 51 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 Q8N9W7 124 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 OR4C16Q8NGL9 310 aa7.85□□□□□ -1.15
GGA3-209ENST00000580646 TERB2Q8NHR7 220 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms