RNA–Protein interactions for RNA: ENST00000561076.1

RTF1-207, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-207ENST00000561076 OR2J1Q9GZK6 312 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 WDR61Q9GZS3 305 aaKnown RBP1.47□□□□□ -2.17
RTF1-207ENST00000561076 WFDC1Q9HC57 220 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 FBXL12Q9NXK8 326 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 TAAR3PQ9P1P4 343 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 PRSS21Q9Y6M0 314 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 MAGI2Q86UL8 1455 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 NOS1P29475 1434 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 CNTLNQ9NXG0 1405 aa1.47□□□□□ -2.17
RTF1-207ENST00000561076 EFCAB5A4FU69 1503 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 CACNA1IQ9P0X4 2223 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 SHANK2Q9UPX8 1470 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 IGHV3-72A0A0B4J1Y9 119 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 IGHV1-3A0A0C4DH29 117 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 A0A0J9YY10 115 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 TMEM269A0A1B0GVZ9 245 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 A0A1B0GX78 115 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 A6NED7 52 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 CCDC160A6NGH7 325 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 IFITM10A6NMD0 228 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 MIF4GDA9UHW6 222 aaKnown RBP1.46□□□□□ -2.18
RTF1-207ENST00000561076 KLLNB2CW77 178 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 C11orf94C9JXX5 98 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 KRTAP4-16G5E9R7 235 aaPredicted RBP1.46□□□□□ -2.18
RTF1-207ENST00000561076 TMX2-CTNND1H3BSU7 103 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 I3L521 148 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 M0R2Z0 102 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 LTAP01374 205 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 IGLV1-47P01700 117 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 IGLV2-8P01709 118 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 IGLV3-27P01718 113 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 CFC1BP0CG36 223 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 CFC1P0CG37 223 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 CYBAP13498 195 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 RPS4Y1P22090 263 aaKnown RBP1.46□□□□□ -2.18
RTF1-207ENST00000561076 SRP14P37108 136 aaKnown RBP1.46□□□□□ -2.18
RTF1-207ENST00000561076 CSN1S1P47710 185 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 CRIP2P52943 208 aaPredicted RBP1.46□□□□□ -2.18
RTF1-207ENST00000561076 TAS2R20P59543 309 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 TBPL1P62380 186 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 RBX1P62877 108 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 RPL30P62888 115 aaKnown RBP1.46□□□□□ -2.18
RTF1-207ENST00000561076 TNFAIP6P98066 277 aaPredicted RBP1.46□□□□□ -2.18
RTF1-207ENST00000561076 AKR1C1Q04828 323 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 DHRS2Q13268 280 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 RNASE13Q5GAN3 156 aaKnown RBP1.46□□□□□ -2.18
RTF1-207ENST00000561076 CYB5R2Q6BCY4 276 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 RPL22L1Q6P5R6 122 aaKnown RBP1.46□□□□□ -2.18
RTF1-207ENST00000561076 MORN3Q6PF18 240 aaPredicted RBP1.46□□□□□ -2.18
RTF1-207ENST00000561076 Q6Q795 121 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 IL34Q6ZMJ4 242 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 C18orf65Q6ZTR6 163 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 SGPP2Q8IWX5 399 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 AMN1Q8IY45 258 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 OR8I2Q8N0Y5 310 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 CEND1Q8N111 149 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 YIPF7Q8N8F6 280 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 PPTC7Q8NI37 304 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 TYMSOSQ8TAI1 123 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 CANT1Q8WVQ1 401 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 OR5P3Q8WZ94 311 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 SLC7A6Q92536 515 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 FAM104AQ969W3 186 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 HIST1H2BAQ96A08 127 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 TOMM6Q96B49 74 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 PLEKHB2Q96CS7 222 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 RBMXL1Q96E39 390 aaKnown RBP1.46□□□□□ -2.18
RTF1-207ENST00000561076 ZNF414Q96IQ9 312 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 CCDC115Q96NT0 180 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 PEBP4Q96S96 227 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 GINS4Q9BRT9 223 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 DOHHQ9BU89 302 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 CHAC1Q9BUX1 264 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 MND1Q9BWT6 205 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 C20orf27Q9GZN8 174 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 TMEM222Q9H0R3 208 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 GABARAPL1Q9H0R8 117 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 OR2D2Q9H210 308 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 C11orf68Q9H3H3 251 aaKnown RBP1.46□□□□□ -2.18
RTF1-207ENST00000561076 RPP21Q9H633 154 aaKnown RBP1.46□□□□□ -2.18
RTF1-207ENST00000561076 LRTM1Q9HBL6 345 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 C8orf17Q9NRJ1 99 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 CA10Q9NS85 328 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 SLC39A9Q9NUM3 307 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 TMEM38BQ9NVV0 291 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 SLC23A2Q9UGH3 650 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 HSPB8Q9UJY1 196 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 JPT1Q9UK76 154 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 SNX12Q9UMY4 172 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 NUBP2Q9Y5Y2 271 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 KIAA0556O60303 1618 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 ATRNO75882 1429 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 FAM135BQ49AJ0 1406 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 ADAMTS13Q76LX8 1427 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 NCOA3Q9Y6Q9 1424 aa1.46□□□□□ -2.18
RTF1-207ENST00000561076 BRCA1P38398 1863 aaKnown RBP1.46□□□□□ -2.18
RTF1-207ENST00000561076 ZFYVE16Q7Z3T8 1539 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 CUL7Q14999 1698 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 PREX1Q8TCU6 1659 aa1.45□□□□□ -2.18
RTF1-207ENST00000561076 CCDC171Q6TFL3 1326 aa1.45□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms