RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 BCL2L2Q92843 193 aaPredicted RBP11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 STARD4Q96DR4 205 aa11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 SFRP2Q96HF1 295 aa11.73□□□□□ -0.53
RABGGTA-220ENST00000560998 SAA2-SAA4A0A096LPE2 208 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 GRIFINA4D1Z8 144 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 AQP7O14520 342 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 PGLYRP1O75594 196 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 OR7C1O76099 320 aaPredicted RBP11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 SERPINE2P07093 398 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 SLC38A11Q08AI6 406 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 TMEM249Q2WGJ8 235 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 BAGE3Q86Y29 109 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 BAGE2Q86Y30 109 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 PNKDQ8N490 385 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 DEFB124Q8NES8 71 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 OR4C5Q8NGB2 326 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 TXNDC17Q9BRA2 123 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 SLC25A22Q9H936 323 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 SLC35D1Q9NTN3 355 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 A0A0G2JRQ6 117 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 UBE2L5PA0A1B0GUS4 154 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 CD300LBA8K4G0 201 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 RNF212BA8MTL3 300 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 C11orf94C9JXX5 98 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 FAM90A26D6RGX4 464 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 DEGS1O15121 323 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 WDR1O75083 606 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 COX5AP20674 150 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 FGF12P61328 243 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 VASH2Q86V25 355 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 NUDT10Q8NFP7 164 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 OR10G9Q8NGN4 311 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 OR10G7Q8NGN6 311 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 GP6Q9HCN6 339 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 KCNIP2Q9NS61 270 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 FBXL7Q9UJT9 491 aa11.72□□□□□ -0.53
RABGGTA-220ENST00000560998 TNFSF12O43508 249 aa11.71□□□□□ -0.53
RABGGTA-220ENST00000560998 PAGE4O60829 102 aa11.71□□□□□ -0.53
RABGGTA-220ENST00000560998 ZNF253O75346 499 aa11.71□□□□□ -0.53
RABGGTA-220ENST00000560998 FTH1P19P0C7X4 201 aa11.71□□□□□ -0.53
RABGGTA-220ENST00000560998 CD33P20138 364 aa11.71□□□□□ -0.53
RABGGTA-220ENST00000560998 TNFSF4P23510 183 aa11.71□□□□□ -0.53
RABGGTA-220ENST00000560998 PMP22Q01453 160 aa11.71□□□□□ -0.53
RABGGTA-220ENST00000560998 ACSM6Q6P461 480 aa11.71□□□□□ -0.53
RABGGTA-220ENST00000560998 OR5A2Q8NGI9 324 aa11.71□□□□□ -0.53
RABGGTA-220ENST00000560998 MRPL18Q9H0U6 180 aaKnown RBP11.71□□□□□ -0.53
RABGGTA-220ENST00000560998 CCL28Q9NRJ3 127 aa11.71□□□□□ -0.53
RABGGTA-220ENST00000560998 CACNA1HO95180 2353 aa11.71□□□□□ -0.53
RABGGTA-220ENST00000560998 DOCK7Q96N67 2140 aa11.71□□□□□ -0.53
RABGGTA-220ENST00000560998 IGKV1D-13A0A0B4J2D9 117 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 IGHV1-69-2A0A0G2JMI3 117 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 SPAARA0A1B0GVQ0 90 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 NKX2-8O15522 239 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 GPX1P07203 203 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 IGKV1-13P0DP09 117 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 KITLGP21583 273 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 SRSF6Q13247 344 aaKnown RBP11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 MDP1Q86V88 176 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 MKXQ8IYA7 352 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 OR10V1Q8NGI7 309 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 HS3ST6Q96QI5 342 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 TMEM147Q9BVK8 224 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 MTCH1Q9NZJ7 389 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 CACNG5Q9UF02 275 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 MED12LQ86YW9 2145 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 NAPSAO96009 420 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 IAPPP10997 89 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 KRTDAPP60985 99 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 RPL19P84098 196 aaKnown RBP11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 OR10J3Q5JRS4 329 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 FFAR4Q5NUL3 377 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 TMEM14EPQ6UXP3 125 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 TCF23Q7RTU1 214 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 NANOS1Q8WY41 292 aaKnown RBP11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 FAM186AA6NE01 2351 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 TTC28Q96AY4 2481 aa11.7□□□□□ -0.54
RABGGTA-220ENST00000560998 IGHV2-26A0A0B4J1V2 119 aa11.69□□□□□ -0.54
RABGGTA-220ENST00000560998 ANKRD30BLA7E2S9 258 aa11.69□□□□□ -0.54
RABGGTA-220ENST00000560998 C1QTNF9BB2RNN3 333 aa11.69□□□□□ -0.54
RABGGTA-220ENST00000560998 TRAPPC2LH3BP13 241 aa11.69□□□□□ -0.54
RABGGTA-220ENST00000560998 NPPCP23582 126 aa11.69□□□□□ -0.54
RABGGTA-220ENST00000560998 RNF151Q2KHN1 245 aa11.69□□□□□ -0.54
RABGGTA-220ENST00000560998 COX19Q49B96 90 aa11.69□□□□□ -0.54
RABGGTA-220ENST00000560998 SVIPQ8NHG7 77 aa11.69□□□□□ -0.54
RABGGTA-220ENST00000560998 TUBG2Q9NRH3 451 aa11.69□□□□□ -0.54
RABGGTA-220ENST00000560998 IL36BQ9NZH7 164 aa11.69□□□□□ -0.54
RABGGTA-220ENST00000560998 OTOGLQ3ZCN5 2332 aa11.69□□□□□ -0.54
RABGGTA-220ENST00000560998 SHANK1Q9Y566 2161 aa11.69□□□□□ -0.54
RABGGTA-220ENST00000560998 SYNGR1O43759 233 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 CIDEAO60543 219 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 MT-ND6P03923 174 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 TMEM11P17152 192 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 TSPOP30536 169 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 CCL11P51671 97 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 GNB1P62873 340 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 RHOGP84095 191 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 OR5T1Q8NG75 326 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 OR10G8Q8NGN5 311 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 GATAD1Q8WUU5 269 aa11.68□□□□□ -0.54
RABGGTA-220ENST00000560998 KCNS1Q96KK3 526 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms