RNA–Protein interactions for RNA: ENST00000556839.5

RALGAPA1-215, Transcript of Ral GTPase activating protein catalytic alpha subunit 1, human

TSL 3

Gene RALGAPA1, Length 1,305 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RALGAPA1-215	ENST00000556839	SOX21	Q9Y651	276 aa	Predicted RBP	4.28	□□□□□ -1.72
RALGAPA1-215	ENST00000556839	NRAP	Q86VF7	1730 aa		4.28	□□□□□ -1.72
RALGAPA1-215	ENST00000556839	DOT1L	Q8TEK3	1739 aa		4.28	□□□□□ -1.72
RALGAPA1-215	ENST00000556839	FRMPD3	Q5JV73	1810 aa		4.28	□□□□□ -1.72
RALGAPA1-215	ENST00000556839	QSER1	Q2KHR3	1735 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	SMIM28	A0A1B0GU29	152 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	C7orf71	A4D174	169 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	NAP1L6	A6NFF2	107 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	LRRC30	A6NM36	301 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	TMEM212	A6NML5	194 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	AGPAT2	O15120	278 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	TBL1X	O60907	577 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	ZNF682	O95780	498 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	TRGC2	P03986	189 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	FCGR3A	P08637	254 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	SPINK8	P0C7L1	97 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	SLC25A4	P12235	298 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	GP1BB	P13224	206 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	RPL35A	P18077	110 aa	Known RBP	4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	TSPO	P30536	169 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	ZNF83	P51522	516 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	TPPP2	P59282	170 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	MEF2C	Q06413	473 aa	Predicted RBP	4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	ENDOG	Q14249	297 aa	Known RBP	4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	DUSP5	Q16690	384 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	TCEAL5	Q5H9L2	206 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	FAM182A	Q5T1J6	154 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	TNFAIP8L2	Q6P589	184 aa	Predicted RBP	4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	PAQR6	Q6TCH4	344 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839		Q6ZN92	141 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	TGIF2LY	Q8IUE0	185 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	OR4N5	Q8IXE1	308 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	C1orf158	Q8N1D5	194 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	LRTM2	Q8N967	370 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	OR2M3	Q8NG83	312 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	OR51A4	Q8NGJ6	313 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	SLC37A2	Q8TED4	501 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	TSACC	Q96A04	125 aa	Predicted RBP	4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	MS4A6E	Q96DS6	147 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	C17orf77	Q96MU5	243 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	IP6K3	Q96PC2	410 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	MCHR1	Q99705	422 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	ATP5S	Q99766	215 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	SPIN2A	Q99865	258 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	SPIN2B	Q9BPZ2	258 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	C19orf24	Q9BVV8	132 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	MRPL32	Q9BYC8	188 aa	Known RBP	4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	FGFBP2	Q9BYJ0	223 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	OR2H1	Q9GZK4	316 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	RHOJ	Q9H4E5	214 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	RERGL	Q9H628	205 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	TMEM9B	Q9NQ34	198 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	MEPE	Q9NQ76	525 aa	Predicted RBP	4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	ACER3	Q9NUN7	267 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	EHF	Q9NZC4	300 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	KLK11	Q9UBX7	282 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	LRRC37A	A6NMS7	1700 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	LTBP1	Q14766	1721 aa		4.27	□□□□□ -1.73
RALGAPA1-215	ENST00000556839		A0A087X0T9	212 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	ODAM	A1E959	279 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839		K7ENP7	123 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	ZNF593	O00488	134 aa	Predicted RBP	4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	PIR	O00625	290 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	MPDU1	O75352	247 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	HYPM	O75409	117 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	PMS2P2	O95744	297 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	SEC11B	P0C7V7	166 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	TPT1	P13693	172 aa	Known RBP	4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	ZNF93	P35789	620 aa	Predicted RBP	4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	RPL13A	P40429	203 aa	Known RBP	4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	GNG5	P63218	68 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	RAB40B	Q12829	278 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	GUSBP1	Q15486	140 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	TGIF1	Q15583	401 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	ZNF542P	Q5EBM4	170 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	DCAF12	Q5T6F0	453 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	ZNF57	Q68EA5	555 aa	Predicted RBP	4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	CDC42EP5	Q6NZY7	148 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	NFAM1	Q8NET5	270 aa	Predicted RBP	4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	OR2T33	Q8NG76	320 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	PPTC7	Q8NI37	304 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	OR51E1	Q8TCB6	317 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	PHLDA1	Q8WV24	401 aa	Predicted RBP	4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	PPCDC	Q96CD2	204 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	TIMD4	Q96H15	378 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	LINC00477	Q96M19	166 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	HSD17B10	Q99714	261 aa	Known RBP	4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	PRADC1	Q9BSG0	188 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	SNRNP25	Q9BV90	132 aa	Known RBP	4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	GGTLC1	Q9BX51	225 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	SLC25A39	Q9BZJ4	359 aa	Predicted RBP	4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	GFRA4	Q9GZZ7	299 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	RETN	Q9HD89	108 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	SIX2	Q9NPC8	291 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	PARP11	Q9NR21	331 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	SDR39U1	Q9NRG7	319 aa	Predicted RBP	4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	TMEM106B	Q9NUM4	274 aa		4.26	□□□□□ -1.73
RALGAPA1-215	ENST00000556839	NSG2	Q9Y328	171 aa		4.26	□□□□□ -1.73

Retrieved 100 of 20,778 RNA–protein pairs in 45 ms