RNA–Protein interactions for RNA: ENST00000553704.2

LINC-ROR-201, Transcript of long intergenic non-protein coding RNA, regulator of reprogramming, humanhuman

TSL 1 (best) BASIC

Gene LINC-ROR, Length 2,603 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC-ROR-201ENST00000553704 TMEM170AQ8WVE7 144 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 NEIL1Q96FI4 390 aaPredicted RBP5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 TMEM204Q9BSN7 226 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 PITPNC1Q9UKF7 332 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 HEATR1Q9H583 2144 aaKnown RBP5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 IGKV1D-17A0A075B6S4 117 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 IGHV1-18A0A0C4DH31 117 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 XKRY2A2RUG3 117 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 RRHO14718 337 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 SLC31A2O15432 143 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 NKX2-8O15522 239 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 TGOLN2O43493 480 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 GATCO43716 136 aaKnown RBP5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 C1QTNF9P0C862 333 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 SELLP14151 372 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 WT1P19544 449 aaPredicted RBP5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 SMIM21Q3B7S5 101 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 LRP11Q86VZ4 500 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 DEFB123Q8N688 67 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 LEAP2Q969E1 77 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 WFIKKN1Q96NZ8 548 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 PATZ1Q9HBE1 687 aaKnown RBP5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 FUT9Q9Y231 359 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 WDR83OSQ9Y284 106 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 DSCAML1Q8TD84 2053 aa5.75□□□□□ -1.49
LINC-ROR-201ENST00000553704 TRBV20OR9-2A0A075B6H5 130 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 IGHV2OR16-5A0A0B4J2B6 119 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 A0A1B0GUS0 222 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 SMCO3A2RU48 225 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 PPP5D1E7EU14 171 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 IGHG3P01860 377 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 MBP02144 154 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 KITLGP21583 273 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 GPR12P47775 334 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 ZNF134P52741 427 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 FAM3BP58499 235 aaPredicted RBP5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 GNB2P62879 340 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 DEFA6Q01524 100 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 ACTL10Q5JWF8 245 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 ZNF66Q6ZN08 573 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 LINC01551Q86U37 167 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 TGIF2LYQ8IUE0 185 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 ZNF709Q8N972 641 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 FDCSPQ8NFU4 85 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 C1orf159Q96HA4 380 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 LURAP1Q96LR2 239 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 CIB3Q96Q77 187 aaPredicted RBP5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 OR5B12Q96R08 314 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 DIRC2Q96SL1 478 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 HSD17B10Q99714 261 aaKnown RBP5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 MGST2Q99735 147 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 OPN3Q9H1Y3 402 aaPredicted RBP5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 DUSP13Q9UII6 198 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 DMXL1Q9Y485 3027 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 PCNX2A6NKB5 2137 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 DSCAMO60469 2012 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 SVILO95425 2214 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 PRSS46E5RG02 174 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 M0R1X1 148 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 GGCTO75223 188 aaKnown RBP5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 GZMBP10144 247 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 IL3RAP26951 378 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 CD1BP29016 333 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 HOXC12P31275 282 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 PRAMEF5Q5TYX0 476 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 FAM78BQ5VT40 261 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 DUX4L9Q6RFH8 374 aaPredicted RBP5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 FAM90A1Q86YD7 464 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 OR2Z1Q8NG97 314 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 TMEM37Q8WXS4 190 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 SDSLQ96GA7 329 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 IFI27L2Q9H2X8 130 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 MS4A5Q9H3V2 200 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 TANC2Q9HCD6 1990 aa5.74□□□□□ -1.49
LINC-ROR-201ENST00000553704 CADP27708 2225 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 VSTM5A8MXK1 200 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 RBFOX2O43251 390 aaKnown RBP eCLIP5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 SOX15O60248 233 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 NDUFB4O95168 129 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 ARL14EPLP0DKL9 152 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 MYOD1P15172 320 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 HNF1AP20823 631 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 DDTP30046 118 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 PRDX2P32119 198 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 VDAC2P45880 294 aaPredicted RBP5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 CCL11P51671 97 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 ACOT6Q3I5F7 207 aaPredicted RBP5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 MORN2Q502X0 79 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 FAM201AQ5SY85 155 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 CST9LP1Q5W188 147 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 MIC13Q5XKP0 118 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 TREML4Q6UXN2 200 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 ZNRF1Q8ND25 227 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 GGTLC1Q9BX51 225 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 GNG12Q9UBI6 72 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 ZNF891A8MT65 544 aaPredicted RBP5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 C17orf112F2Z3M2 114 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 AQP7O14520 342 aa5.73□□□□□ -1.49
LINC-ROR-201ENST00000553704 SPINT2O43291 252 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms