RNA–Protein interactions for RNA: ENST00000550552.5

TMEM106C-215, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best) BASIC

Gene TMEM106C, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-215ENST00000550552 THBS3P49746 956 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 SSBP2P81877 361 aaPredicted RBP5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 DYRK1AQ13627 763 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 KIAA0141Q14154 515 aaPredicted RBP5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 TMEM177Q53S58 311 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 C19orf54Q5BKX5 351 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 PDPNQ86YL7 162 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 SNX29P2Q8IUI4 249 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 RNF152Q8N8N0 203 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 RAB2BQ8WUD1 216 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 ISOC1Q96CN7 298 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 R3HDM4Q96D70 268 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 DGCR14Q96DF8 476 aaKnown RBP5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 KLK15Q9H2R5 256 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 CCL28Q9NRJ3 127 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 SLC35D1Q9NTN3 355 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 METTL1Q9UBP6 276 aaKnown RBP5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 ZNF580Q9UK33 172 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 RBMX2Q9Y388 322 aaKnown RBP5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 TSSC4Q9Y5U2 329 aaPredicted RBP5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 NUBP2Q9Y5Y2 271 aa5.08□□□□□ -1.6
TMEM106C-215ENST00000550552 FAM25AB3EWG3 89 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 FAM25CB3EWG5 89 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 FAM25GB3EWG6 89 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 ARPC1BO15143 372 aaKnown RBP5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 SLC25A17O43808 307 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 SOX15O60248 233 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 SLC22A5O76082 557 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 PPYP01298 95 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 IGLV1-40P01703 118 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 APOA2P02652 100 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 PSMB8P28062 276 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 HLA-DMAP28067 261 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 GNRHRP30968 328 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 LGALS7P47929 136 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 RPL23AP62750 156 aaKnown RBP5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 CDK10Q15131 360 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 PLGLAQ15195 96 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 TEX38Q6PEX7 206 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 ZNF562Q6V9R5 426 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 ZNF818PQ6ZRF7 136 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 PPP1R27Q86WC6 154 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 LAX1Q8IWV1 398 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 VKORC1L1Q8N0U8 176 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 MFSD4AQ8N468 514 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 COMMD1Q8N668 190 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 WFDC9Q8NEX5 89 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 OR5T1Q8NG75 326 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 OR4X2Q8NGF9 303 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 SECTM1Q8WVN6 248 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 AP3S1Q92572 193 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 ADTRPQ96IZ2 230 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 TSNAXQ99598 290 aaKnown RBP5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 FAM103A1Q9BTL3 118 aaKnown RBP5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 KRTAP3-3Q9BYR6 98 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 KRTAP3-2Q9BYR7 98 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 SLIRPQ9GZT3 109 aaKnown RBP5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 IFT46Q9NQC8 304 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 PARP11Q9NR21 331 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 TAS2R8Q9NYW2 309 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 EHFQ9NZC4 300 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 KIAA1456Q9P272 454 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 KLK11Q9UBX7 282 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 ADAM30Q9UKF2 790 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 NOTCH3Q9UM47 2321 aa5.07□□□□□ -1.6
TMEM106C-215ENST00000550552 TRAV41A0A0B4J266 112 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 SULT1C2O00338 296 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 RGS5O15539 181 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 TNFSF12O43508 249 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 RAMP3O60896 148 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 FCGR3BO75015 233 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 SPDEFO95238 335 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 DHFRP00374 187 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 CA2P00918 260 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 ELANEP08246 267 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 RRASP10301 218 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 PTBP1P26599 531 aaKnown RBP eCLIP5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 HRH1P35367 487 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 CRIP2P52943 208 aaPredicted RBP5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 FXYD4P59646 89 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 UBE2KP61086 200 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 SLC35B1P78383 322 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 FOXE3Q13461 319 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 FXYD3Q14802 87 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 RTL8BQ17RB0 113 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 AKIRIN2Q53H80 203 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 LBHQ53QV2 105 aaPredicted RBP5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 RNASE12Q5GAN4 147 aaKnown RBP5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 OR2B11Q5JQS5 317 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 ETV3LQ6ZN32 361 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 KCTD9Q7L273 389 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 LFNGQ8NES3 379 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 OR4F17Q8NGA8 305 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 OR52I2Q8NH67 350 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 MYOZ3Q8TDC0 251 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 CASTOR1Q8WTX7 329 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 OR4F4Q96R69 305 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 HSD17B10Q99714 261 aaKnown RBP5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 SOSTQ9BQB4 213 aa5.06□□□□□ -1.6
TMEM106C-215ENST00000550552 ZNF2Q9BSG1 426 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms