RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 ZIC3O60481 467 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 CXCL1P09341 107 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 CEBPDP49716 269 aaPredicted RBP16.51■□□□□ 0.23
SUDS3-204ENST00000543473 ZNF826PQ6ZT77 177 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 ABHD12Q8N2K0 398 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 WNT10AQ9GZT5 417 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 ASCL3Q9NQ33 180 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 THSD7BQ9C0I4 1608 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 NDUFA2O43678 99 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 NDUFS6O75380 124 aaKnown RBP16.51■□□□□ 0.23
SUDS3-204ENST00000543473 MAS1LP35410 378 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 TNFSF10P50591 281 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 PYY3Q5JQD4 70 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 RNF7Q9UBF6 113 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 TMEM56-RWDD3S4R434 201 aa16.51■□□□□ 0.23
SUDS3-204ENST00000543473 FREM3P0C091 2139 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 FAM89BQ8N5H3 189 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 RASL11BQ9BPW5 248 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 COX7A1P24310 79 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 GCHFRP30047 84 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 PRRX1P54821 245 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 PLP1P60201 277 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 SUPT4H1P63272 117 aaKnown RBP16.5■□□□□ 0.23
SUDS3-204ENST00000543473 SLC35E4Q6ICL7 350 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 SCGB1D4Q6XE38 83 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 GBGT1Q8N5D6 347 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 ZNF525Q8N782 197 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 TMEM54Q969K7 222 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 TBL2Q9Y4P3 447 aaKnown RBP16.5■□□□□ 0.23
SUDS3-204ENST00000543473 CEACAM18A8MTB9 384 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 SLC17A3O00476 420 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 P2RY6Q15077 328 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 ZNF658BQ4V348 819 aaPredicted RBP16.5■□□□□ 0.23
SUDS3-204ENST00000543473 MIEN1Q9BRT3 115 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 THYN1Q9P016 225 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 UFC1Q9Y3C8 167 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 LOC389332A0A1B0GUA5 103 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 C14orf144Q96I85 54 aa16.5■□□□□ 0.23
SUDS3-204ENST00000543473 DOCK4Q8N1I0 1966 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 A0A0A6YYD4 124 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 ORM1P02763 201 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 PRNTQ86SH4 94 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 DOLPP1Q86YN1 238 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 CALHM1Q8IU99 346 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 HS3ST3B1Q9Y662 390 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 NPIPB7O75200 414 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 PLAUP00749 431 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 C8orf88P0DMB2 117 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 CENPWQ5EE01 88 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 LURAP1LQ8IV03 231 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 LINC00271P0C7V0 271 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 MPV17P39210 176 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 HSPE1P61604 102 aaKnown RBP16.49■□□□□ 0.23
SUDS3-204ENST00000543473 FAM222BQ8WU58 562 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 SRXN1Q9BYN0 137 aa16.49■□□□□ 0.23
SUDS3-204ENST00000543473 PGPA6NDG6 321 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 HYPMO75409 117 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 IL36BQ9NZH7 164 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 TCF19Q9Y242 345 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 IGKV1D-8A0A087WSZ0 117 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 UCP2P55851 309 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 SELENOTP62341 195 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 AMMECR1Q9Y4X0 333 aaPredicted RBP16.48■□□□□ 0.23
SUDS3-204ENST00000543473 hCG_38984A0A1B0GV85 526 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 TIAF1O95411 115 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 APELAP0DMC3 54 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 LHFPL1Q86WI0 220 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 SSBP3Q9BWW4 388 aaPredicted RBP16.48■□□□□ 0.23
SUDS3-204ENST00000543473 IGKV3D-11A0A0A0MRZ8 115 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 IGHV1-45A0A0A0MS14 117 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 GNG7O60262 68 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 FABP2P12104 132 aa16.48■□□□□ 0.23
SUDS3-204ENST00000543473 HLA-DRB1P01911 266 aa16.47■□□□□ 0.23
SUDS3-204ENST00000543473 TMEM108Q6UXF1 575 aa16.47■□□□□ 0.23
SUDS3-204ENST00000543473 OR8B2Q96RD0 313 aa16.47■□□□□ 0.23
SUDS3-204ENST00000543473 OPN3Q9H1Y3 402 aaPredicted RBP16.47■□□□□ 0.23
SUDS3-204ENST00000543473 ODAMA1E959 279 aa16.47■□□□□ 0.23
SUDS3-204ENST00000543473 E9PQ18 207 aa16.47■□□□□ 0.23
SUDS3-204ENST00000543473 LDLRAD4O15165 306 aa16.47■□□□□ 0.23
SUDS3-204ENST00000543473 SLC25A33Q9BSK2 321 aa16.47■□□□□ 0.23
SUDS3-204ENST00000543473 ATP5G3P48201 142 aa16.47■□□□□ 0.23
SUDS3-204ENST00000543473 REG1BP48304 166 aa16.47■□□□□ 0.23
SUDS3-204ENST00000543473 FAM166AQ6J272 317 aa16.47■□□□□ 0.23
SUDS3-204ENST00000543473 ONECUT1Q9UBC0 465 aa16.47■□□□□ 0.23
SUDS3-204ENST00000543473 IGHV3-21A0A0B4J1V1 117 aa16.47■□□□□ 0.23
SUDS3-204ENST00000543473 BTF3P20290 206 aaKnown RBP16.47■□□□□ 0.23
SUDS3-204ENST00000543473 TRBV24-1A0A075B6N3 115 aa16.46■□□□□ 0.23
SUDS3-204ENST00000543473 PROB1E7EW31 1015 aa16.46■□□□□ 0.23
SUDS3-204ENST00000543473 RPL7P18124 248 aaKnown RBP16.46■□□□□ 0.23
SUDS3-204ENST00000543473 MUC15Q8N387 334 aa16.46■□□□□ 0.23
SUDS3-204ENST00000543473 STPG3Q8N7X2 389 aa16.46■□□□□ 0.23
SUDS3-204ENST00000543473 NABP2Q9BQ15 211 aa16.46■□□□□ 0.23
SUDS3-204ENST00000543473 MRPL13Q9BYD1 178 aaKnown RBP16.46■□□□□ 0.23
SUDS3-204ENST00000543473 DCAF16Q9NXF7 216 aa16.46■□□□□ 0.23
SUDS3-204ENST00000543473 SNRNP200O75643 2136 aaKnown RBP16.46■□□□□ 0.23
SUDS3-204ENST00000543473 TFF3Q07654 80 aa16.46■□□□□ 0.23
SUDS3-204ENST00000543473 FGF11Q92914 225 aa16.46■□□□□ 0.23
SUDS3-204ENST00000543473 ZDHHC16Q969W1 377 aa16.46■□□□□ 0.23
SUDS3-204ENST00000543473 RAB37Q96AX2 223 aa16.46■□□□□ 0.23
SUDS3-204ENST00000543473 SNRNP40Q96DI7 357 aaKnown RBP16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms