RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 RBFOX1Q9NWB1 397 aaKnown RBP2.8□□□□□ -1.96
SNHG1-217ENST00000541578 PSG11Q9UQ72 335 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 HS3ST2Q9Y278 367 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 AP4S1Q9Y587 144 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 OBSCNQ5VST9 7968 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 FBN3Q75N90 2809 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 CNTRLQ7Z7A1 2325 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 CCDC88CQ9P219 2028 aa2.8□□□□□ -1.96
SNHG1-217ENST00000541578 MTORP42345 2549 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 IGLV4-69A0A075B6H9 119 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 A0A096LNJ9 63 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 TMEM223A0PJW6 202 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 OR5H1A6NKK0 313 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 M0QYV0 167 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 UPK2O00526 184 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 CRXO43186 299 aaPredicted RBP2.79□□□□□ -1.96
SNHG1-217ENST00000541578 FADS1O60427 444 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 PSMG1O95456 288 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 IGLV3-27P01718 113 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 IGHV3-11P01762 117 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 RLN2P04090 185 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 RD3LP0DJH9 198 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 PSG2P11465 335 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 CCL4P13236 92 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 HLA-GP17693 338 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 PVALBP20472 110 aaPredicted RBP2.79□□□□□ -1.96
SNHG1-217ENST00000541578 ME2P23368 584 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 IDH3GP51553 393 aaPredicted RBP2.79□□□□□ -1.96
SNHG1-217ENST00000541578 SLC18A1P54219 525 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 MAGOHP61326 146 aaKnown RBP2.79□□□□□ -1.96
SNHG1-217ENST00000541578 RHOAP61586 193 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 PPP1CAP62136 330 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 MYL5Q02045 173 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 TNFRSF9Q07011 255 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 BNIP2Q12982 314 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 GRK1Q15835 563 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 CYHR1Q6ZMK1 362 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 C10orf107Q8IVU9 208 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 C4orf33Q8N1A6 199 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 MMGT1Q8N4V1 131 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 CYB561D1Q8N8Q1 229 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 LINC00301Q8NCQ3 95 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 OR4K5Q8NGD3 323 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 OR9A2Q8NGT5 310 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 OR6N1Q8NGY5 312 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 OR4K15Q8NH41 348 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 OR5AK3PQ8NH89 298 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 TMEM203Q969S6 136 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 L3HYPDHQ96EM0 354 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 C14orf144Q96I85 54 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 CYYR1Q96J86 154 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 KCNS1Q96KK3 526 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 FAM19A4Q96LR4 140 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 PACRGQ96M98 296 aaPredicted RBP2.79□□□□□ -1.96
SNHG1-217ENST00000541578 GGTLC1Q9BX51 225 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 SLC25A39Q9BZJ4 359 aaPredicted RBP2.79□□□□□ -1.96
SNHG1-217ENST00000541578 ULBP1Q9BZM6 244 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 PCBD2Q9H0N5 130 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 PRO0628Q9UI54 55 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 BAIAP2Q9UQB8 552 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 FARSAQ9Y285 508 aaKnown RBP2.79□□□□□ -1.96
SNHG1-217ENST00000541578 MMACHCQ9Y4U1 282 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 HSPE1-MOB4S4R3N1 261 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 ANKRD36A6QL64 1941 aa2.79□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF106Q9H2Y7 1883 aaKnown RBP2.79□□□□□ -1.96
SNHG1-217ENST00000541578 LRP4O75096 1905 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 CCDC168Q8NDH2 2452 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-217ENST00000541578 A0A0G2JMP0 313 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 A0A0X1KG70 313 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 A0A1B0GVX0 72 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 CLDN25C9JDP6 229 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 SMLR1H3BR10 107 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 I3L521 148 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 BPY2O14599 106 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 ARPC5O15511 151 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 RGS5O15539 181 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 DLEU1O43261 78 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 CD8AP01732 235 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 NBEAP1P0C6P0 100 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 TLX1NBP0CAT3 122 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 C1GALT1C1LP0DN25 315 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 IFI30P13284 250 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 ZNF7P17097 686 aaPredicted RBP2.78□□□□□ -1.96
SNHG1-217ENST00000541578 IL1RNP18510 177 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 POLR2IP36954 125 aaKnown RBP2.78□□□□□ -1.96
SNHG1-217ENST00000541578 GABRA4P48169 554 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 TTPAP49638 278 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 RAB25P57735 213 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 RPS24P62847 133 aaKnown RBP2.78□□□□□ -1.96
SNHG1-217ENST00000541578 BIKQ13323 160 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 RAB31Q13636 194 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 TMEM249Q2WGJ8 235 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 ATP6AP1LQ52LC2 224 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 AKIRIN2Q53H80 203 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 RNASE10Q5GAN6 216 aaKnown RBP2.78□□□□□ -1.96
SNHG1-217ENST00000541578 PABPC1L2AQ5JQF8 200 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 RBM48Q5RL73 367 aaKnown RBP2.78□□□□□ -1.96
SNHG1-217ENST00000541578 LCE3AQ5TA76 89 aa2.78□□□□□ -1.96
SNHG1-217ENST00000541578 KHDRBS2Q5VWX1 349 aaKnown RBP2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms