RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 PDLIM4P50479 330 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 UCNP55089 124 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 GNG3P63215 75 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 BSXQ3C1V8 233 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 PEAR1Q5VY43 1037 aaPredicted RBP4.45□□□□□ -1.7
PROM1-220ENST00000540805 ATOH7Q8N100 152 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 GBGT1Q8N5D6 347 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 TMEM251Q8N6I4 163 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 PRSS33Q8NF86 280 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 OR2M7Q8NG81 312 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 CMTM2Q8TAZ6 248 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 ALKBH7Q9BT30 221 aaPredicted RBP4.45□□□□□ -1.7
PROM1-220ENST00000540805 SAP30LQ9HAJ7 183 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 RPRMQ9NS64 109 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 FKBP11Q9NYL4 201 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 ANKRD11Q6UB99 2663 aaPredicted RBP4.45□□□□□ -1.7
PROM1-220ENST00000540805 RALGAPA1Q6GYQ0 2036 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 A0A1W2PPQ1 181 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 C20orf202A1L168 122 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 A6NJY4 79 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 M0QZK8 103 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 GGCTO75223 188 aaKnown RBP4.45□□□□□ -1.7
PROM1-220ENST00000540805 VDAC1P21796 283 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 ID3Q02535 119 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 TMEM267Q0VDI3 215 aaPredicted RBP4.45□□□□□ -1.7
PROM1-220ENST00000540805 PIGYQ3MUY2 71 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 CYP2G1PQ6ZSU1 146 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 OSR2Q8N2R0 312 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 FDCSPQ8NFU4 85 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 MRGPRDQ8TDS7 321 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 VN1R17PQ8TDU5 208 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 MBD3L1Q8WWY6 194 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 SIGLEC12Q96PQ1 595 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 RSG1Q9BU20 258 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 RAB1BQ9H0U4 201 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 OR51I2Q9H344 312 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 PRSS50Q9UI38 385 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 F8P00451 2351 aa4.45□□□□□ -1.7
PROM1-220ENST00000540805 KIR2DL5BA0A0G2JN68 375 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 KIR2DL5BA0A0G2JPC4 375 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 A0A0J9YW62 118 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 CLEC18AA5D8T8 446 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 F2Z2F3 143 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 HAX1O00165 279 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 EFNA2O43921 213 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 PDCD6O75340 191 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 HRASP01112 189 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 OR10J4P0C629 311 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 CT45A6P0DMU7 189 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 CT45A5P0DMU8 189 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 CT45A7P0DMV0 189 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 MGST1P10620 155 aaKnown RBP4.44□□□□□ -1.7
PROM1-220ENST00000540805 LIFP15018 202 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 HTN1P15515 57 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 HINT1P49773 126 aaPredicted RBP4.44□□□□□ -1.7
PROM1-220ENST00000540805 PPP1CBP62140 327 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 ARL16Q0P5N6 197 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 GAGE1Q13065 139 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 TMEM241Q24JQ0 296 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 NMSQ5H8A3 153 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 CT45A1Q5HYN5 189 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 PRR31Q5SQ13 230 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 LDLRAD2Q5SZI1 272 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 C1orf194Q5T5A4 169 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 LEMD1Q68G75 181 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 LHFPL2Q6ZUX7 228 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 MOGAT3Q86VF5 341 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 DTX1Q86Y01 620 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 KIR2DL5AQ8N109 375 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 TPRX1Q8N7U7 411 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 CLEC18CQ8NCF0 446 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 OR51G1Q8NGK1 321 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 CT45A3Q8NHU0 189 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 AGMATQ9BSE5 352 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 ERRFI1Q9UJM3 462 aaPredicted RBP4.44□□□□□ -1.7
PROM1-220ENST00000540805 PSG11Q9UQ72 335 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 RAXQ9Y2V3 346 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 FN1P02751 2386 aaKnown RBP4.44□□□□□ -1.7
PROM1-220ENST00000540805 MAP1LC3B2A6NCE7 125 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 AQP7P3A6NL99 342 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 SMAD7O15105 426 aaKnown RBP4.44□□□□□ -1.7
PROM1-220ENST00000540805 MDH2P40926 338 aaKnown RBP4.44□□□□□ -1.7
PROM1-220ENST00000540805 CDKN1BP46527 198 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 SCGB2A2Q13296 93 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 ACTL10Q5JWF8 245 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 Q6ZSR3 168 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 TCF23Q7RTU1 214 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 RNF138Q8WVD3 245 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 MAP1LC3BQ9GZQ8 125 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 RBKSQ9H477 322 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 VSIRQ9H7M9 311 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 SLC7A10Q9NS82 523 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 ZNF737O75373 536 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 KBTBD11O94819 623 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 UCP1P25874 307 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 NPBWR2P48146 333 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 TMPRSS3P57727 454 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 RPL23P62829 140 aaKnown RBP4.44□□□□□ -1.7
PROM1-220ENST00000540805 HBG1P69891 147 aa4.44□□□□□ -1.7
PROM1-220ENST00000540805 HBG2P69892 147 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 116.8 ms