RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 LRRC19Q9H756 370 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 UBAP1Q9NZ09 502 aa1.72□□□□□ -2.13
PRKDC-205ENST00000535375 DICER1Q9UPY3 1922 aaKnown RBP1.72□□□□□ -2.13
PRKDC-205ENST00000535375 ADGRB3O60242 1522 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 NAV1Q8NEY1 1877 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 EVC2Q86UK5 1308 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 SNAPC4Q5SXM2 1469 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 MDFIC2A0A1B0GVS7 189 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 A0A1B0GW54 56 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 M0R036 132 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 COX7A2LO14548 114 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 ZNF728P0DKX0 622 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 TAS2R30P59541 319 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 BATFQ16520 125 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 HIST3H3Q16695 136 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 ACSM3Q53FZ2 586 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 ALKAL1Q6UXT8 129 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 UMODL1-AS1Q8N2C9 162 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 TMEM86BQ8N661 226 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 ZNF565Q8N9K5 539 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 MRPS26Q9BYN8 205 aaKnown RBP1.71□□□□□ -2.14
PRKDC-205ENST00000535375 CXCL16Q9H2A7 254 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 TAAR3PQ9P1P4 343 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 DSCAMO60469 2012 aa1.71□□□□□ -2.14
PRKDC-205ENST00000535375 ATG2BQ96BY7 2078 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 CACNA1AO00555 2505 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 IGHV1-69-2A0A0G2JMI3 117 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 OR4C45A6NMZ5 311 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 GNRH2O43555 120 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 S100A6P06703 90 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 OR5G3P0C626 314 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 UCHL3P15374 230 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 GABRA2P47869 451 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 TCL1AP56279 114 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 PRDX4Q13162 271 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 ITGB3BPQ13352 177 aaPredicted RBP1.7□□□□□ -2.14
PRKDC-205ENST00000535375 C5orf46Q6UWT4 87 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 PACRGLQ8N7B6 248 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 RAB2BQ8WUD1 216 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 DIRAS2Q96HU8 199 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 DNAJC30Q96LL9 226 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 Q9BRP9 147 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 PECRQ9BY49 303 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 REREQ9P2R6 1566 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 PXMP4Q9Y6I8 212 aa1.7□□□□□ -2.14
PRKDC-205ENST00000535375 DOCK6Q96HP0 2047 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 TRPM6Q9BX84 2022 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 C11orf86A6NJI1 115 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 KCNK1O00180 336 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 LST1O00453 97 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 UBE2L6O14933 153 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 NPYP01303 97 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 MAP2K4P45985 399 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 RPL27AP46776 148 aaKnown RBP1.69□□□□□ -2.14
PRKDC-205ENST00000535375 CDK9P50750 372 aaKnown RBP1.69□□□□□ -2.14
PRKDC-205ENST00000535375 DEFB103AP81534 67 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 TNFAIP8L3Q5GJ75 292 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 FAM201AQ5SY85 155 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 HIST2H3AQ71DI3 136 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 SLC22A24Q8N4F4 322 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 PRO2289Q9P1D8 64 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 AK3Q9UIJ7 227 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 ADAMTS7Q9UKP4 1686 aa1.69□□□□□ -2.14
PRKDC-205ENST00000535375 ZNF638Q14966 1978 aaKnown RBP1.68□□□□□ -2.14
PRKDC-205ENST00000535375 DCCP43146 1447 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 A0A1W2PQD3 144 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 SMIM23A6NLE4 172 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 A8MUN3 132 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 LY6LH3BQJ8 138 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 TRAPPC3O43617 180 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 IFNA16P05015 189 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 LHFPL5Q8TAF8 219 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 SLC35B4Q969S0 331 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 C12orf43Q96C57 262 aaKnown RBP1.68□□□□□ -2.14
PRKDC-205ENST00000535375 C8orf76Q96K31 380 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 NMNAT3Q96T66 252 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 MIEN1Q9BRT3 115 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 GPR84Q9NQS5 396 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 FKBP14Q9NWM8 211 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 COL4A2P08572 1712 aa1.68□□□□□ -2.14
PRKDC-205ENST00000535375 TRGV4A0A0C4DH28 118 aa1.67□□□□□ -2.14
PRKDC-205ENST00000535375 A0A1W2PQL4 384 aaPredicted RBP1.67□□□□□ -2.14
PRKDC-205ENST00000535375 INMT-MINDY4F8WBC2 141 aa1.67□□□□□ -2.14
PRKDC-205ENST00000535375 PMAIP1Q13794 54 aa1.67□□□□□ -2.14
PRKDC-205ENST00000535375 HES1Q14469 280 aa1.67□□□□□ -2.14
PRKDC-205ENST00000535375 KRTAP21-3Q3LHN1 58 aa1.67□□□□□ -2.14
PRKDC-205ENST00000535375 GLT6D1Q7Z4J2 308 aa1.67□□□□□ -2.14
PRKDC-205ENST00000535375 ZNF283Q8N7M2 679 aa1.67□□□□□ -2.14
PRKDC-205ENST00000535375 ZNF675Q8TD23 568 aa1.67□□□□□ -2.14
PRKDC-205ENST00000535375 IMP4Q96G21 291 aaKnown RBP1.67□□□□□ -2.14
PRKDC-205ENST00000535375 CXorf21Q9HAI6 301 aa1.67□□□□□ -2.14
PRKDC-205ENST00000535375 PRELID1Q9Y255 219 aa1.67□□□□□ -2.14
PRKDC-205ENST00000535375 LSM5Q9Y4Y9 91 aaKnown RBP1.67□□□□□ -2.14
PRKDC-205ENST00000535375 TGIF2-C20orf24A0A0A6YYL0 155 aa1.66□□□□□ -2.14
PRKDC-205ENST00000535375 TRGV5A0A0B4J1U4 118 aa1.66□□□□□ -2.14
PRKDC-205ENST00000535375 BHLHE40O14503 412 aa1.66□□□□□ -2.14
PRKDC-205ENST00000535375 PLA2G10O15496 165 aa1.66□□□□□ -2.14
PRKDC-205ENST00000535375 CCL5P13501 91 aa1.66□□□□□ -2.14
PRKDC-205ENST00000535375 ANP32AP39687 249 aaKnown RBP1.66□□□□□ -2.14
PRKDC-205ENST00000535375 TAS2R20P59543 309 aa1.66□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 128.7 ms