RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 C4orf17Q53FE4 359 aa12.64□□□□□ -0.39
USP47-207ENST00000527733 BLNKQ8WV28 456 aa12.64□□□□□ -0.39
USP47-207ENST00000527733 AQP10Q96PS8 301 aa12.64□□□□□ -0.39
USP47-207ENST00000527733 QTRT1Q9BXR0 403 aaKnown RBP12.64□□□□□ -0.39
USP47-207ENST00000527733 SAMD10Q9BYL1 202 aa12.64□□□□□ -0.39
USP47-207ENST00000527733 ZNF320A2RRD8 509 aa12.64□□□□□ -0.39
USP47-207ENST00000527733 RGS13O14921 159 aa12.64□□□□□ -0.39
USP47-207ENST00000527733 LILRA1O75019 489 aa12.64□□□□□ -0.39
USP47-207ENST00000527733 ZNF672Q499Z4 452 aaPredicted RBP12.64□□□□□ -0.39
USP47-207ENST00000527733 HCP5Q6MZN7 132 aa12.64□□□□□ -0.39
USP47-207ENST00000527733 VKORC1L1Q8N0U8 176 aa12.64□□□□□ -0.39
USP47-207ENST00000527733 YPEL1O60688 119 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 TOX4O94842 621 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 OR4P4Q8NGL7 312 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 OR2T10Q8NGZ9 312 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 YPEL2Q96QA6 119 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 CABLES2Q9BTV7 478 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 IGHV3-21A0A0B4J1V1 117 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 RBFOX3A6NFN3 312 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 CEACAM4O75871 244 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 TFF1P04155 84 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 ZNF250P15622 560 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 HSD17B13Q7Z5P4 300 aaPredicted RBP12.63□□□□□ -0.39
USP47-207ENST00000527733 RTN4RL2Q86UN3 420 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 ADAMTS9Q9P2N4 1935 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 CEACAM18A8MTB9 384 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 STXBP6Q8NFX7 210 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 OR5R1Q8NH85 324 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 CTXND1A0A1B0GTU2 59 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 NTF4P34130 210 aa12.63□□□□□ -0.39
USP47-207ENST00000527733 PATZ1Q9HBE1 687 aaKnown RBP12.63□□□□□ -0.39
USP47-207ENST00000527733 HKR1P10072 659 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 BTCP35070 178 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 RUNX1Q01196 453 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 PSG5Q15238 335 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 NCMAPQ5T1S8 102 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 C10orf113Q5VZT2 155 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 OR8I2Q8N0Y5 310 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 MANBALQ9NQG1 85 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 WNK2Q9Y3S1 2297 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 F8VVB4 439 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 F8VWA3 439 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 SSTP61278 116 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 PDPNQ86YL7 162 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 FAM215AQ9Y5M1 114 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 C17orf98A8MV24 154 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 CD8AP01732 235 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 SELENOTP62341 195 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 SLC35E3Q7Z769 313 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 SMIM8Q96KF7 97 aa12.62□□□□□ -0.39
USP47-207ENST00000527733 ADIPOQQ15848 244 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 UNQ5815/PRO19632Q6UWF5 114 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 RNF144BQ7Z419 303 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 NECAP1Q8NC96 275 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 NCOR2Q9Y618 2525 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 IGKV1D-8A0A087WSZ0 117 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 IGKV1D-13A0A0B4J2D9 117 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 IGKV1-13P0DP09 117 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 TMEM241Q24JQ0 296 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 OR11H4Q8NGC9 324 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 OR10J1P30954 320 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 PPOXP50336 477 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 Q5BKY6 102 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 OR5B3Q8NH48 314 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 KIAA1549LQ6ZVL6 1849 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 PCDH15Q96QU1 1955 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 MED13LQ71F56 2210 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 ZP3P21754 424 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 MPZP25189 248 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 RPL35P42766 123 aaKnown RBP12.61□□□□□ -0.39
USP47-207ENST00000527733 ERVFC1-1P60608 527 aa12.61□□□□□ -0.39
USP47-207ENST00000527733 MLNRO43193 412 aa12.6□□□□□ -0.39
USP47-207ENST00000527733 ZNF735P0CB33 412 aa12.6□□□□□ -0.39
USP47-207ENST00000527733 ATP5IP56385 69 aaPredicted RBP12.6□□□□□ -0.39
USP47-207ENST00000527733 MORN2Q502X0 79 aa12.6□□□□□ -0.39
USP47-207ENST00000527733 OR4C12Q96R67 309 aa12.6□□□□□ -0.39
USP47-207ENST00000527733 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.6□□□□□ -0.399e-7■■■■■ 30.7
USP47-207ENST00000527733 IGHV3OR16-10A0A075B7F0 116 aa12.6□□□□□ -0.39
USP47-207ENST00000527733 C10orf142B7Z368 130 aa12.6□□□□□ -0.39
USP47-207ENST00000527733 PSPNO60542 156 aa12.6□□□□□ -0.39
USP47-207ENST00000527733 TMEM178BH3BS89 294 aa12.6□□□□□ -0.39
USP47-207ENST00000527733 EFNA4P52798 201 aa12.6□□□□□ -0.39
USP47-207ENST00000527733 SRSF7Q16629 238 aaKnown RBP eCLIP12.6□□□□□ -0.39
USP47-207ENST00000527733 ZNF788Q6ZQV5 615 aa12.6□□□□□ -0.39
USP47-207ENST00000527733 MED13Q9UHV7 2174 aa12.6□□□□□ -0.39
USP47-207ENST00000527733 TAF15Q92804 592 aaKnown RBP eCLIP12.6□□□□□ -0.39
USP47-207ENST00000527733 RSG1Q9BU20 258 aa12.6□□□□□ -0.39
USP47-207ENST00000527733 PXMP4Q9Y6I8 212 aa12.6□□□□□ -0.39
USP47-207ENST00000527733 KIAA2026Q5HYC2 2103 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 QRFPP83859 136 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 OR5I1Q13606 314 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 DPPA3Q6W0C5 159 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 C20orf204Q6ZNR8 217 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 TMEM133Q9H2Q1 129 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 VAX2Q9UIW0 290 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 DNASE2O00115 360 aaPredicted RBP12.59□□□□□ -0.39
USP47-207ENST00000527733 HYPMO75409 117 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 PF4V1P10720 104 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 TOLLIPQ9H0E2 274 aa12.59□□□□□ -0.39
USP47-207ENST00000527733 C7orf69Q9H7B7 122 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 173 ms