RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 ECSCRQ19T08 205 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 NSUN5P1Q3KNT7 163 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 LCNL1Q6ZST4 164 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 SSX9Q7RTT3 188 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 TBC1D26Q86UD7 250 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 SLC38A6Q8IZM9 456 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 Q8N402 240 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 OSR1Q8TAX0 266 aaPredicted RBP10.08□□□□□ -0.8
VEGFA-224ENST00000523873 MARCH1Q8TCQ1 289 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 CHPT1Q8WUD6 406 aa10.08□□□□□ -0.8
VEGFA-224ENST00000523873 SDHCQ99643 169 aaPredicted RBP10.08□□□□□ -0.8
VEGFA-224ENST00000523873 DISC1C4P0D8 188 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 S1PR2O95136 353 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 TSPAN15O95858 294 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 EGR2P11161 476 aaPredicted RBP10.07□□□□□ -0.8
VEGFA-224ENST00000523873 UBE2KP61086 200 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 FXYD3Q14802 87 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 BAK1Q16611 211 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 VMA21Q3ZAQ7 101 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 KHDC1LQ5JSQ8 128 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 PPP1R27Q86WC6 154 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 CMTM1Q8IZ96 169 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 OR51S1Q8NGJ8 323 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 OR13C8Q8NGS7 320 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 TERB2Q8NHR7 220 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 GRPEL2Q8TAA5 225 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 MCUBQ9NWR8 336 aa10.07□□□□□ -0.8
VEGFA-224ENST00000523873 TRAV41A0A0B4J266 112 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 TCRBV4S1A1TA0A5B7 111 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 ADARB2-AS1A8MUL3 147 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 IGF1P05019 195 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 VDAC1P21796 283 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 PTBP1P26599 531 aaKnown RBP eCLIP10.06□□□□□ -0.8
VEGFA-224ENST00000523873 LPAR6P43657 344 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 SLC35B1P78383 322 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 CD83Q01151 205 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 CFHR3Q02985 330 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 TNXAQ16473 311 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 ZNF585BQ52M93 769 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 LPCAT3Q6P1A2 487 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 C18orf65Q6ZTR6 163 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 TOMM5Q8N4H5 51 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 TEX45Q8NA69 505 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 OR4X2Q8NGF9 303 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 ARPC1AQ92747 370 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 BORCS5Q969J3 196 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 HRASLSQ9HDD0 168 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 SLC2A9Q9NRM0 540 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 WNK1Q9H4A3 2382 aa10.06□□□□□ -0.8
VEGFA-224ENST00000523873 TRAV3A0A0B4J244 114 aa10.05□□□□□ -0.8
VEGFA-224ENST00000523873 CNIH1O95406 144 aa10.05□□□□□ -0.8
VEGFA-224ENST00000523873 HPRT1P00492 218 aa10.05□□□□□ -0.8
VEGFA-224ENST00000523873 APELAP0DMC3 54 aa10.05□□□□□ -0.8
VEGFA-224ENST00000523873 MYOD1P15172 320 aa10.05□□□□□ -0.8
VEGFA-224ENST00000523873 PIGPP57054 158 aa10.05□□□□□ -0.8
VEGFA-224ENST00000523873 PRSS8Q16651 343 aa10.05□□□□□ -0.8
VEGFA-224ENST00000523873 C10orf55Q5SWW7 151 aa10.05□□□□□ -0.8
VEGFA-224ENST00000523873 ZNF57Q68EA5 555 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-224ENST00000523873 ZNF562Q6V9R5 426 aa10.05□□□□□ -0.8
VEGFA-224ENST00000523873 PUSL1Q8N0Z8 303 aaKnown RBP10.05□□□□□ -0.8
VEGFA-224ENST00000523873 POC5Q8NA72 575 aa10.05□□□□□ -0.8
VEGFA-224ENST00000523873 LFNGQ8NES3 379 aa10.05□□□□□ -0.8
VEGFA-224ENST00000523873 CASTOR1Q8WTX7 329 aa10.05□□□□□ -0.8
VEGFA-224ENST00000523873 ZNF430Q9H8G1 570 aaPredicted RBP10.05□□□□□ -0.8
VEGFA-224ENST00000523873 LINC00854A0A1B0GVQ3 168 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 A0A1W2PN81 502 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 MPPED1O15442 326 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 RBFOX2O43251 390 aaKnown RBP eCLIP10.04□□□□□ -0.85e-9■□□□□ 10.6
VEGFA-224ENST00000523873 SOX15O60248 233 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 KBTBD11O94819 623 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 OR2A4O95047 310 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 RPLP1P05386 114 aaKnown RBP10.04□□□□□ -0.8
VEGFA-224ENST00000523873 CTSDP07339 412 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-224ENST00000523873 F2RP25116 425 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 PPIFP30405 207 aaKnown RBP10.04□□□□□ -0.8
VEGFA-224ENST00000523873 CHRNA7P36544 502 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 RND3P61587 244 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 C19orf54Q5BKX5 351 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 OR4A47Q6IF82 309 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 UNQ5815/PRO19632Q6UWF5 114 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 NDUFA11Q86Y39 141 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 GDPD1Q8N9F7 314 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 SGMS2Q8NHU3 365 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 R3HDM4Q96D70 268 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 RHOVQ96L33 236 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 OR2A7Q96R45 310 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 PRRT1Q99946 306 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 RTBDNQ9BSG5 229 aaPredicted RBP10.04□□□□□ -0.8
VEGFA-224ENST00000523873 C5orf66Q9H5L9 145 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 AKIP1Q9NQ31 210 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 BATF3Q9NR55 127 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 NUBP2Q9Y5Y2 271 aa10.04□□□□□ -0.8
VEGFA-224ENST00000523873 M0QZ24 198 aa10.03□□□□□ -0.8
VEGFA-224ENST00000523873 HRASP01112 189 aa10.03□□□□□ -0.8
VEGFA-224ENST00000523873 OPN1MWP04001 364 aa10.03□□□□□ -0.8
VEGFA-224ENST00000523873 OPN1MW2P0DN77 364 aa10.03□□□□□ -0.8
VEGFA-224ENST00000523873 OPN1MW3P0DN78 364 aa10.03□□□□□ -0.8
VEGFA-224ENST00000523873 NQO2P16083 231 aa10.03□□□□□ -0.8
VEGFA-224ENST00000523873 S100GP29377 79 aa10.03□□□□□ -0.8
VEGFA-224ENST00000523873 G6PCP35575 357 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms