RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 KCNRGQ8N5I3 272 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 FAM71E2Q8N5Q1 922 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 OR11H6Q8NGC7 330 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 OR4P4Q8NGL7 312 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 OR10X1Q8NGY0 326 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 OR4S2Q8NH73 311 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 LHFPL5Q8TAF8 219 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 ST6GALNAC6Q969X2 333 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 CLCC1Q96S66 551 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 TBX15Q96SF7 602 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 FOXC2Q99958 501 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 ARPC5LQ9BPX5 153 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 SLC25A31Q9H0C2 315 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 SIRT7Q9NRC8 400 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 PLSCR3Q9NRY6 295 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 UBQLN2Q9UHD9 624 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 MMP24Q9Y5R2 645 aa6.93□□□□□ -1.3
VAPB-206ENST00000520497 SONP18583 2426 aaKnown RBP6.93□□□□□ -1.3
VAPB-206ENST00000520497 FAM90A9PA6NNJ1 464 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 B4DSR2 109 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 FAM90A26D6RGX4 464 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 HRASP01112 189 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 CXCL2P19875 107 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 EPHA1P21709 976 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 P2RY1P47900 373 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 RPL23AP62750 156 aaKnown RBP6.92□□□□□ -1.3
VAPB-206ENST00000520497 PRB3Q04118 309 aaPredicted RBP6.92□□□□□ -1.3
VAPB-206ENST00000520497 ZNF816Q0VGE8 651 aaPredicted RBP6.92□□□□□ -1.3
VAPB-206ENST00000520497 KLRD1Q13241 179 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 ZNF585BQ52M93 769 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 NMSQ5H8A3 153 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 PNKDQ8N490 385 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 OR4D5Q8NGN0 318 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 OR13D1Q8NGV5 346 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 DDB2Q92466 427 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 TMEM186Q96B77 213 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 Q96MF0 132 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 AQP10Q96PS8 301 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 RAB40CQ96S21 281 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 SMR3AQ99954 134 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 REG4Q9BYZ8 158 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 HEXA-AS1Q9H8Q6 139 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 LPAR2Q9HBW0 351 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 COA4Q9NYJ1 87 aa6.92□□□□□ -1.3
VAPB-206ENST00000520497 TRAV20A0A0B4J274 112 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 MPTX1A8MV57 137 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 RNASEK-C17orf49H0YIS7 233 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 LY6LH3BQJ8 138 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 BUB1B-PAK6H3BSN5 160 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 TXNL1O43396 289 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 FCGR3BO75015 233 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 RBMXL2O75526 392 aaKnown RBP6.91□□□□□ -1.3
VAPB-206ENST00000520497 TOX4O94842 621 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 IGKV1-39P01597 117 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 MBPP02686 304 aaPredicted RBP6.91□□□□□ -1.3
VAPB-206ENST00000520497 IGKV1D-39P04432 117 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 CT45A6P0DMU7 189 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 CT45A5P0DMU8 189 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 CT45A7P0DMV0 189 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 IGHV4-31P0DP07 118 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 NQO2P16083 231 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 COX7A1P24310 79 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 RPL12P30050 165 aaKnown RBP6.91□□□□□ -1.3
VAPB-206ENST00000520497 RAB13P51153 203 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 LINC00205P59089 165 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 IL15RAQ13261 267 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 DIAPH2-AS1Q14236 149 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 OR2B11Q5JQS5 317 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 LDLRAD2Q5SZI1 272 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 NCR3LG1Q68D85 454 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 EIF5AL1Q6IS14 154 aaKnown RBP6.91□□□□□ -1.3
VAPB-206ENST00000520497 Q71RC1 249 aaPredicted RBP6.91□□□□□ -1.3
VAPB-206ENST00000520497 LINC01356Q8N9X3 169 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 ZNF383Q8NA42 475 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 WFDC11Q8NEX6 87 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 DMBX1Q8NFW5 382 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 R3HDM4Q96D70 268 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 CIB3Q96Q77 187 aaPredicted RBP6.91□□□□□ -1.3
VAPB-206ENST00000520497 ZNF471Q9BX82 626 aaPredicted RBP6.91□□□□□ -1.3
VAPB-206ENST00000520497 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.91□□□□□ -1.3
VAPB-206ENST00000520497 CACNG5Q9UF02 275 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 RCL1Q9Y2P8 373 aaKnown RBP6.91□□□□□ -1.3
VAPB-206ENST00000520497 ZFHX3Q15911 3703 aa6.91□□□□□ -1.3
VAPB-206ENST00000520497 C2CD3Q4AC94 2353 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 SETD2Q9BYW2 2564 aaPredicted RBP6.9□□□□□ -1.3
VAPB-206ENST00000520497 BORCS7-ASMTA0A0B4J1R7 106 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 RNF222A6NCQ9 220 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 SSSCA1O60232 199 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 RAMP3O60896 148 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 S1PR2O95136 353 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 KRASP01116 189 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 TPT1P13693 172 aaKnown RBP6.9□□□□□ -1.3
VAPB-206ENST00000520497 CD99P14209 185 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 GATA3P23771 443 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 MC5RP33032 325 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 CEACAM3P40198 252 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 UBE2E1P51965 193 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 BAXQ07812 192 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 TMEM249Q2WGJ8 235 aa6.9□□□□□ -1.3
VAPB-206ENST00000520497 TEX261Q6UWH6 196 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms