RNA–Protein interactions for RNA: ENST00000511421.5

SH3RF1-205, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 1,657 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-205ENST00000511421 SLA2Q9H6Q3 261 aa8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 IFT46Q9NQC8 304 aa8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 TAS2R8Q9NYW2 309 aa8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 MRPS7Q9Y2R9 242 aaKnown RBP8.99□□□□□ -0.97
SH3RF1-205ENST00000511421 K7EIL1 84 aa8.98□□□□□ -0.97
SH3RF1-205ENST00000511421 LGALS1P09382 135 aaKnown RBP8.98□□□□□ -0.97
SH3RF1-205ENST00000511421 ELK1P19419 428 aa8.98□□□□□ -0.97
SH3RF1-205ENST00000511421 PRSS3P35030 304 aa8.98□□□□□ -0.97
SH3RF1-205ENST00000511421 TPPP2P59282 170 aa8.98□□□□□ -0.97
SH3RF1-205ENST00000511421 DHRS11Q6UWP2 260 aa8.98□□□□□ -0.97
SH3RF1-205ENST00000511421 POC5Q8NA72 575 aa8.98□□□□□ -0.97
SH3RF1-205ENST00000511421 ZBTB34Q8NCN2 500 aa8.98□□□□□ -0.97
SH3RF1-205ENST00000511421 GPX8Q8TED1 209 aa8.98□□□□□ -0.97
SH3RF1-205ENST00000511421 TCTEX1D2Q8WW35 142 aa8.98□□□□□ -0.97
SH3RF1-205ENST00000511421 DCUN1D5Q9BTE7 237 aa8.98□□□□□ -0.97
SH3RF1-205ENST00000511421 SLC5A7Q9GZV3 580 aa8.98□□□□□ -0.97
SH3RF1-205ENST00000511421 ZNF430Q9H8G1 570 aaPredicted RBP8.98□□□□□ -0.97
SH3RF1-205ENST00000511421 WI2-2373I1.2A0A1W2PRP0 233 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 H3BUA1 57 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 TNFSF12O43508 249 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 HPGDSO60760 199 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 BRI3O95415 125 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 IGHV3-11P01762 117 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 TRGV3P03979 118 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 OR8U8P0C7N1 319 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 CD40LGP29965 261 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 RFX2P48378 723 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 DYRK1AQ13627 763 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 TNXAQ16473 311 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 LYSMD2Q8IV50 215 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 VKORC1L1Q8N0U8 176 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 OR4S2Q8NH73 311 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 DPF1Q92782 380 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 EHFQ9NZC4 300 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 SCOCQ9UIL1 159 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 MSGN1A6NI15 193 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 FXYD4P59646 89 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 C9orf66Q5T8R8 295 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 ZNF818PQ6ZRF7 136 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 MMD2Q8IY49 270 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 PUSL1Q8N0Z8 303 aaKnown RBP8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 SRSF12Q8WXF0 261 aaKnown RBP8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 DCUN1D4Q92564 292 aa8.97□□□□□ -0.97
SH3RF1-205ENST00000511421 IGHV4OR15-8A0A075B7B6 117 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 A0A087WW49 117 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 SMIM31A0A1B0GVY4 71 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 SEC14L6B5MCN3 397 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 LINC01619G3V211 115 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 RAMP3O60896 148 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 PMP2P02689 132 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 APELAP0DMC3 54 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 ZNF182P17025 639 aaPredicted RBP8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 GNRHRP30968 328 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 KIR2DS2P43631 304 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 SLURP1P55000 103 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 TAS2R46P59540 309 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 C10orf55Q5SWW7 151 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 GPR141Q7Z602 305 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 TMEM17Q86X19 198 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 ADAD2Q8NCV1 583 aaKnown RBP8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 OR5H2Q8NGV7 314 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 TMEM167AQ8TBQ9 72 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 DLX4Q92988 240 aaPredicted RBP8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 MOB3AQ96BX8 217 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 ZNF2Q9BSG1 426 aaPredicted RBP8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 TINAGL1Q9GZM7 467 aaPredicted RBP8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 SCPEP1Q9HB40 452 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 ZNF355PQ9NSJ1 428 aa8.96□□□□□ -0.98
SH3RF1-205ENST00000511421 SULT1C2O00338 296 aa8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 RBFOX2O43251 390 aaKnown RBP eCLIP8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 CREBL2O60519 120 aaPredicted RBP8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 RBMXL2O75526 392 aaKnown RBP8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 KBTBD11O94819 623 aa8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 OR2A4O95047 310 aa8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 HSPB1P04792 205 aaKnown RBP8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 HRH1P35367 487 aa8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 HERV-K104P61576 105 aa8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 DGCR2P98153 550 aa8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 MZT2AQ6P582 158 aa8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 SNX29P2Q8IUI4 249 aa8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 SPAG16Q8N0X2 631 aa8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 AP3S1Q92572 193 aa8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 OR2A7Q96R45 310 aa8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 PHB2Q99623 299 aa8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 ADAM30Q9UKF2 790 aa8.95□□□□□ -0.98
SH3RF1-205ENST00000511421 E7EUB6 86 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 OVOL1O14753 267 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 OR9G9P0C7N8 305 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 HLA-DMAP28067 261 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 CATR1Q13166 79 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 SPCS2Q15005 226 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 VSTM2AQ8TAG5 236 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 COA4Q9NYJ1 87 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 ZMAT5Q9UDW3 170 aaKnown RBP8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 A0A0G2JLM5 398 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 C13orf42A0A1B0GVH6 325 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 A0A1B0GW64 132 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 FAM25AB3EWG3 89 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 FAM25CB3EWG5 89 aa8.94□□□□□ -0.98
SH3RF1-205ENST00000511421 FAM25GB3EWG6 89 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms