RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ZNF585BQ52M93 769 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 PYDC2Q56P42 97 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 KPRPQ5T749 579 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 LCNL1Q6ZST4 164 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 C18orf65Q6ZTR6 163 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 REC114Q7Z4M0 266 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 VKORC1L1Q8N0U8 176 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 Q8N402 240 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 WFDC9Q8NEX5 89 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 NPBQ8NG41 125 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 MRAPQ8TCY5 172 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 TMEM230Q96A57 120 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 RCC1LQ96I51 464 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 RTBDNQ9BSG5 229 aaPredicted RBP6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 RSRP1Q9BUV0 290 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 OR51J1Q9H342 316 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 FBXL15Q9H469 300 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 HRASLSQ9HDD0 168 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 SLC35D1Q9NTN3 355 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 VSIG4Q9Y279 399 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 WASHC3Q9Y3C0 194 aa6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 PRKDCP78527 4128 aaKnown RBP6.85□□□□□ -1.31
PDLIM5-213ENST00000509357 IGHV7-81A0A0B4J1V7 117 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 TRAV41A0A0B4J266 112 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 E7EUB6 86 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 ARPC1BO15143 372 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 PGLYRP1O75594 196 aaPredicted RBP6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 HLA-DRB1P01911 266 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 APOA2P02652 100 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 RLN1P04808 185 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 IGF1P05019 195 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 MYCNOSP40205 109 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 THBS3P49746 956 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 RPS16P62249 146 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 SSBP1Q04837 148 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 CBX3Q13185 183 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 PSG5Q15238 335 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 ECSCRQ19T08 205 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 C5orf64Q2M2E5 130 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 PHLDA2Q53GA4 152 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 TMEM177Q53S58 311 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 C19orf54Q5BKX5 351 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 RNASE10Q5GAN6 216 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 IDO2Q6ZQW0 420 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 MRPL41Q8IXM3 137 aaKnown RBP6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 LINC00482Q8N8I6 264 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 OR51S1Q8NGJ8 323 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 MARCH1Q8TCQ1 289 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 DUX3Q96PT4 197 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 CLCC1Q96S66 551 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 GPR61Q9BZJ8 451 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 C5orf66Q9H5L9 145 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 BATF3Q9NR55 127 aa6.84□□□□□ -1.31
PDLIM5-213ENST00000509357 TRAV3A0A0B4J244 114 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 CGB1A6NKQ9 187 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 G3V318 75 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 CCL24O00175 119 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 RRHO14718 337 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 ATP6V0E1O15342 81 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 FCGR3BO75015 233 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 S1PR2O95136 353 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 CRYZL1O95825 349 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 IGHG4P01861 327 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 IL6RP08887 468 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 AKAIN1P0CW23 69 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 IL7P13232 177 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 PTBP1P26599 531 aaKnown RBP eCLIP6.83□□□□□ -1.321e-6■■■□□ 16.5
PDLIM5-213ENST00000509357 S100A5P33763 92 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 UCP3P55916 312 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 TAGLNQ01995 201 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 CFHR3Q02985 330 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 TMEM267Q0VDI3 215 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 MSMO1Q15800 293 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 DEFB136Q30KP8 78 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 C10orf55Q5SWW7 151 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 ASPHD1Q5U4P2 390 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 KCTD9Q7L273 389 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 PDPNQ86YL7 162 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 ARRDC1Q8N5I2 433 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 ADAD2Q8NCV1 583 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 OR6F1Q8NGZ6 308 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 OR51H1Q8NH63 302 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 LHFPL5Q8TAF8 219 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 FLYWCH2Q96CP2 140 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 TP53RKQ96S44 253 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 TSNAXQ99598 290 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 MCRIP2Q9BUT9 160 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 AURKAIP1Q9NWT8 199 aaPredicted RBP6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 SLC2A8Q9NY64 477 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 PRR13Q9NZ81 148 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 METTL1Q9UBP6 276 aaKnown RBP6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 TBC1D24Q9ULP9 559 aa6.83□□□□□ -1.32
PDLIM5-213ENST00000509357 TGP01266 2768 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 DBX1A6NMT0 343 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 SLC25A17O43808 307 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 SOX15O60248 233 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 RBMXL2O75526 392 aaKnown RBP6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 CNIH1O95406 144 aa6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 SAA1P0DJI8 122 aaPredicted RBP6.82□□□□□ -1.32
PDLIM5-213ENST00000509357 TBPP20226 339 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms