RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 L3HYPDHQ96EM0 354 aa3.17□□□□□ -1.9
PDLIM1P4-201ENST00000504327 AURKBQ96GD4 344 aaPredicted RBP3.17□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SLC45A3Q96JT2 553 aa3.17□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ARHGDIGQ99819 225 aa3.17□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SFXN3Q9BWM7 321 aa3.17□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SLC25A31Q9H0C2 315 aa3.17□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OPTCQ9UBM4 332 aa3.17□□□□□ -1.9
PDLIM1P4-201ENST00000504327 PAIP2BQ9ULR5 123 aaKnown RBP3.17□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SIGLEC7Q9Y286 467 aa3.17□□□□□ -1.9
PDLIM1P4-201ENST00000504327 UFC1Q9Y3C8 167 aa3.17□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SLC22A7Q9Y694 548 aa3.17□□□□□ -1.9
PDLIM1P4-201ENST00000504327 PCM1Q15154 2024 aa3.17□□□□□ -1.9
PDLIM1P4-201ENST00000504327 DNHD1Q96M86 4753 aa3.17□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SMG1Q96Q15 3661 aaKnown RBP3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 IGHV1-69DA0A0B4J2H0 117 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 IGHV5-51A0A0C4DH38 117 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 A0A1B0GXF2 115 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 CIB4A0PJX0 185 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TMX2-CTNND1H3BSU7 103 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 CCDC22O60826 627 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SPAG7O75391 227 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 STK16O75716 305 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ARL6IP5O75915 188 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ATG12O94817 140 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 S1PR2O95136 353 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR5G3P0C626 314 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR13C7P0DN81 318 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 S100A1P23297 94 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 PEBP1P30086 187 aaKnown RBP3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 APLNRP35414 380 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 P2RY4P51582 365 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 H2BFSP57053 126 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 UBE2NP61088 152 aaKnown RBP3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 GNGT1P63211 74 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 GNG3P63215 75 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 IFITM3Q01628 133 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 IFITM2Q01629 132 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 EIF3IQ13347 325 aaKnown RBP3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 C1DQ13901 141 aaKnown RBP3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 HERPUD1Q15011 391 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ACOT6Q3I5F7 207 aaPredicted RBP3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 CCSMST1Q4G0I0 132 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 PRR30Q53SZ7 412 aaPredicted RBP3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 LRRC10Q5BKY1 277 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ZNF684Q5T5D7 378 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ZNF493Q6ZR52 646 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 LINC00173Q6ZV60 143 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 C6orf120Q7Z4R8 191 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 CALHM3Q86XJ0 350 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TMEM86BQ8N661 226 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 LINC01555Q8NAE3 123 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR4E2Q8NGC2 313 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR10K1Q8NGX5 313 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR4X1Q8NH49 305 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR13C6PQ8NH95 151 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 BORCS7Q96B45 105 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 FMC1Q96HJ9 113 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SMIM8Q96KF7 97 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR52E6Q96RD3 313 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ATOH8Q96SQ7 321 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ZNF382Q96SR6 550 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 RTBDNQ9BSG5 229 aaPredicted RBP3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 EFCAB11Q9BUY7 163 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 MIXL1Q9H2W2 232 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 OR51I2Q9H344 312 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 Q9H3A6 140 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 SPANXA1Q9NS26 97 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 TMEM216Q9P0N5 145 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 GLS2Q9UI32 602 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ZNF223Q9UK11 482 aaPredicted RBP3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 ANGPT4Q9Y264 503 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 MDC1Q14676 2089 aaKnown RBP3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 FLNCQ14315 2725 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 C2CD3Q4AC94 2353 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 COL6A6A6NMZ7 2263 aa3.16□□□□□ -1.9
PDLIM1P4-201ENST00000504327 PQLC2LA1A4F0 135 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 NDUFAF8A1L188 74 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 A8MT66 165 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 TXNDC9O14530 226 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 EDF1O60869 148 aaKnown RBP3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 KBTBD11O94819 623 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SUPT7LO94864 414 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 TNFSF15O95150 251 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 TRBV12-3P01733 135 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 PPBPP02775 128 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 OR4A8P0C604 315 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 NELFEP18615 380 aaKnown RBP3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 S100GP29377 79 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 DDTP30046 118 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ZNF138P52744 262 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 SYNJ2BPP57105 145 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 PSG4Q00888 419 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 EBPQ15125 230 aaKnown RBP3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 RGNQ15493 299 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ZNF678Q5SXM1 525 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 TSPO2Q5TGU0 170 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 TMEM236Q5W0B7 351 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 FBXW9Q5XUX1 488 aa3.15□□□□□ -1.91
PDLIM1P4-201ENST00000504327 ZNF774Q6NX45 483 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms