RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 MARCH11A6NNE9 402 aa15.51■□□□□ 0.07
USP39-218ENST00000493829 SRRM4A7MD48 611 aaKnown RBP15.51■□□□□ 0.07
USP39-218ENST00000493829 MMDQ15546 238 aa15.51■□□□□ 0.07
USP39-218ENST00000493829 IZUMO4Q1ZYL8 232 aa15.51■□□□□ 0.07
USP39-218ENST00000493829 TMEM177Q53S58 311 aa15.51■□□□□ 0.07
USP39-218ENST00000493829 TMEM56Q96MV1 263 aa15.51■□□□□ 0.07
USP39-218ENST00000493829 DUX5Q96PT3 197 aa15.51■□□□□ 0.07
USP39-218ENST00000493829 COMMD9Q9P000 198 aa15.51■□□□□ 0.07
USP39-218ENST00000493829 TMEM56-RWDD3S4R434 201 aa15.51■□□□□ 0.07
USP39-218ENST00000493829 FAM90A9PA6NNJ1 464 aa15.51■□□□□ 0.07
USP39-218ENST00000493829 HOXA3O43365 443 aaPredicted RBP15.51■□□□□ 0.07
USP39-218ENST00000493829 IGKV1-5P01602 117 aa15.51■□□□□ 0.07
USP39-218ENST00000493829 F2RL1P55085 397 aa15.51■□□□□ 0.07
USP39-218ENST00000493829 ERVK-16P61578 105 aa15.51■□□□□ 0.07
USP39-218ENST00000493829 OSR1Q8TAX0 266 aaPredicted RBP15.51■□□□□ 0.07
USP39-218ENST00000493829 A0A0G2JRQ6 117 aa15.5■□□□□ 0.07
USP39-218ENST00000493829 GOSR2O14653 212 aa15.5■□□□□ 0.07
USP39-218ENST00000493829 SLC25A17O43808 307 aa15.5■□□□□ 0.07
USP39-218ENST00000493829 SAA1P0DJI8 122 aaPredicted RBP15.5■□□□□ 0.07
USP39-218ENST00000493829 NQO2P16083 231 aa15.5■□□□□ 0.07
USP39-218ENST00000493829 IER3P46695 156 aa15.5■□□□□ 0.07
USP39-218ENST00000493829 DYNLT3P51808 116 aa15.5■□□□□ 0.07
USP39-218ENST00000493829 C2orf68Q2NKX9 166 aa15.5■□□□□ 0.07
USP39-218ENST00000493829 Q6YL49 198 aa15.5■□□□□ 0.07
USP39-218ENST00000493829 RHOVQ96L33 236 aa15.5■□□□□ 0.07
USP39-218ENST00000493829 TPSG1Q9NRR2 321 aa15.5■□□□□ 0.07
USP39-218ENST00000493829 FAM212BQ9NTI7 297 aaPredicted RBP15.5■□□□□ 0.07
USP39-218ENST00000493829 TCF19Q9Y242 345 aa15.5■□□□□ 0.07
USP39-218ENST00000493829 NCBP2LA6PVI3 153 aaKnown RBP15.49■□□□□ 0.07
USP39-218ENST00000493829 FAM25EA8MYX2 175 aa15.49■□□□□ 0.07
USP39-218ENST00000493829 HRASP01112 189 aa15.49■□□□□ 0.07
USP39-218ENST00000493829 IGLV2-23P01705 113 aa15.49■□□□□ 0.07
USP39-218ENST00000493829 SEC22AQ96IW7 307 aa15.49■□□□□ 0.07
USP39-218ENST00000493829 TMEM140Q9NV12 185 aa15.49■□□□□ 0.07
USP39-218ENST00000493829 ZFHX3Q15911 3703 aa15.49■□□□□ 0.07
USP39-218ENST00000493829 NAV3Q8IVL0 2385 aa15.49■□□□□ 0.07
USP39-218ENST00000493829 RBMS3Q6XE24 437 aaKnown RBP15.48■□□□□ 0.07
USP39-218ENST00000493829 Q8N6K4 173 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 LRTM2Q8N967 370 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 IL22RA2Q969J5 263 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 RRNAD1Q96FB5 475 aaKnown RBP15.48■□□□□ 0.07
USP39-218ENST00000493829 MED28Q9H204 178 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 NSD1Q96L73 2696 aaPredicted RBP15.48■□□□□ 0.07
USP39-218ENST00000493829 A0A0B4J2A0 478 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 BTBD17A6NE02 478 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 MPTX1A8MV57 137 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 NBR2O15453 112 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 SIX6O95475 246 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 SCGB2A2Q13296 93 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 EBI3Q14213 229 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 PLGLAQ15195 96 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 PSG5Q15238 335 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 GGNBP1Q5YKI7 109 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 OR4A47Q6IF82 309 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 H2BFWTQ7Z2G1 175 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 THNSL2Q86YJ6 484 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 CLCC1Q96S66 551 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 TSNAXQ99598 290 aaKnown RBP15.48■□□□□ 0.07
USP39-218ENST00000493829 SLC25A33Q9BSK2 321 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 FBXL15Q9H469 300 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 MGAT4CQ9UBM8 478 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 METTL1Q9UBP6 276 aaKnown RBP15.48■□□□□ 0.07
USP39-218ENST00000493829 SHPKQ9UHJ6 478 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 NSG2Q9Y328 171 aa15.48■□□□□ 0.07
USP39-218ENST00000493829 MTORP42345 2549 aa15.47■□□□□ 0.07
USP39-218ENST00000493829 TRAV3A0A0B4J244 114 aa15.47■□□□□ 0.07
USP39-218ENST00000493829 C13orf42A0A1B0GVH6 325 aa15.47■□□□□ 0.07
USP39-218ENST00000493829 OR2B8PP59922 312 aa15.47■□□□□ 0.07
USP39-218ENST00000493829 FCN2Q15485 313 aa15.47■□□□□ 0.07
USP39-218ENST00000493829 AANATQ16613 207 aa15.47■□□□□ 0.07
USP39-218ENST00000493829 VMA21Q3ZAQ7 101 aa15.47■□□□□ 0.07
USP39-218ENST00000493829 SSMEM1Q8WWF3 244 aa15.47■□□□□ 0.07
USP39-218ENST00000493829 KIAA1456Q9P272 454 aa15.47■□□□□ 0.07
USP39-218ENST00000493829 A6NDX4 124 aa15.46■□□□□ 0.07
USP39-218ENST00000493829 DBX1A6NMT0 343 aa15.46■□□□□ 0.07
USP39-218ENST00000493829 CHST1O43916 411 aa15.46■□□□□ 0.07
USP39-218ENST00000493829 ATG12O94817 140 aa15.46■□□□□ 0.07
USP39-218ENST00000493829 NXPH3O95157 252 aa15.46■□□□□ 0.07
USP39-218ENST00000493829 OR9G9P0C7N8 305 aa15.46■□□□□ 0.07
USP39-218ENST00000493829 FAM219AQ8IW50 185 aa15.46■□□□□ 0.07
USP39-218ENST00000493829 GPR146Q96CH1 333 aa15.46■□□□□ 0.07
USP39-218ENST00000493829 SH2D7A6NKC9 451 aaPredicted RBP15.45■□□□□ 0.06
USP39-218ENST00000493829 IFNA21P01568 189 aa15.45■□□□□ 0.06
USP39-218ENST00000493829 VDAC1P21796 283 aa15.45■□□□□ 0.06
USP39-218ENST00000493829 LGALS7P47929 136 aa15.45■□□□□ 0.06
USP39-218ENST00000493829 UBE2KP61086 200 aa15.45■□□□□ 0.06
USP39-218ENST00000493829 RRAS2P62070 204 aaPredicted RBP15.45■□□□□ 0.06
USP39-218ENST00000493829 NMSQ5H8A3 153 aa15.45■□□□□ 0.06
USP39-218ENST00000493829 OR5R1Q8NH85 324 aa15.45■□□□□ 0.06
USP39-218ENST00000493829 PRDM13Q9H4Q3 707 aa15.45■□□□□ 0.06
USP39-218ENST00000493829 VPREB3Q9UKI3 123 aa15.45■□□□□ 0.06
USP39-218ENST00000493829 MMP24Q9Y5R2 645 aa15.45■□□□□ 0.06
USP39-218ENST00000493829 C5orf51A6NDU8 294 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 DNAJC9-AS1A6NH13 148 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 RRHO14718 337 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 KBTBD11O94819 623 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 OR2A4O95047 310 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 CADM3Q8N126 398 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 OR11H7Q8NGC8 314 aa15.44■□□□□ 0.06
USP39-218ENST00000493829 RBM14Q96PK6 669 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms