RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 NAPSAO96009 420 aa9.82□□□□□ -0.84
EXOSC3-207ENST00000490516 IGFBP3P17936 291 aaPredicted RBP9.82□□□□□ -0.84
EXOSC3-207ENST00000490516 PSMB6P28072 239 aa9.82□□□□□ -0.84
EXOSC3-207ENST00000490516 ZNF367Q7RTV3 350 aa9.82□□□□□ -0.84
EXOSC3-207ENST00000490516 AQP12AQ8IXF9 295 aa9.82□□□□□ -0.84
EXOSC3-207ENST00000490516 TMEM190Q8WZ59 177 aa9.82□□□□□ -0.84
EXOSC3-207ENST00000490516 MRPL48Q96GC5 212 aaKnown RBP9.82□□□□□ -0.84
EXOSC3-207ENST00000490516 C5orf30Q96GV9 206 aa9.82□□□□□ -0.84
EXOSC3-207ENST00000490516 ZNF436Q9C0F3 470 aaPredicted RBP9.82□□□□□ -0.84
EXOSC3-207ENST00000490516 EXOGQ9Y2C4 368 aaKnown RBP9.82□□□□□ -0.84
EXOSC3-207ENST00000490516 TRAV8-7A0A075B6U6 113 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 IGHV3OR16-8A0A075B7F1 116 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 TRBV7-1A0A0A6YYK4 115 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 DPPA5A6NC42 116 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 NPIPB5A8MRT5 1133 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 E7EUB6 86 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 DYNC1I1O14576 645 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 CRYZL1O95825 349 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 GSTT2P0CG29 244 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 GSTT2BP0CG30 244 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 GBX2P52951 348 aaPredicted RBP9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 RTL8BQ17RB0 113 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 XAF1Q6GPH4 301 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 PLET1Q6UQ28 207 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 LGALS12Q96DT0 336 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 NEDD4LQ96PU5 975 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 CIB1Q99828 191 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 DAZ1Q9NQZ3 744 aaKnown RBP9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 SDHAF2Q9NX18 166 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 X6R8D5 127 aa9.81□□□□□ -0.84
EXOSC3-207ENST00000490516 IGKV3-7A0A075B6H7 116 aa9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 A0A1B0GW64 132 aa9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 ZNF207O43670 478 aaKnown RBP9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 MRPS14O60783 128 aaKnown RBP9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 IL6RP08887 468 aaPredicted RBP9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 GIG44P09565 113 aaPredicted RBP9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 SAA1P0DJI8 122 aaPredicted RBP9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 AREGP15514 252 aa9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 HLA-DRB3P79483 266 aa9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 RNF212Q495C1 297 aa9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 Q5VSD8 79 aa9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 SSX9Q7RTT3 188 aa9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 HDHD3Q9BSH5 251 aaPredicted RBP9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 THTPAQ9BU02 230 aa9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 OR2D2Q9H210 308 aa9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 RDH8Q9NYR8 311 aa9.8□□□□□ -0.84
EXOSC3-207ENST00000490516 IGKV1-6A0A0C4DH72 117 aa9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 HOXB6P17509 224 aaKnown RBP9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 CMC4P56277 68 aaPredicted RBP9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 KRTAP10-2P60368 255 aa9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 MRPL28Q13084 256 aaKnown RBP9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 CDK10Q15131 360 aa9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 MOB1BQ7L9L4 216 aa9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 SPATA24Q86W54 205 aa9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 MMD2Q8IY49 270 aa9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 ZNF502Q8TBZ5 544 aa9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 FYTTD1Q96QD9 318 aaKnown RBP9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 RNF2Q99496 336 aa9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 FAM107BQ9H098 131 aa9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 IMPAD1Q9NX62 359 aa9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 ERVK13-1Q9NX77 482 aa9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 ETV7Q9Y603 341 aa9.79□□□□□ -0.84
EXOSC3-207ENST00000490516 ZNF705EA8MWA4 302 aaPredicted RBP9.78□□□□□ -0.84
EXOSC3-207ENST00000490516 G3V2T6 193 aa9.78□□□□□ -0.84
EXOSC3-207ENST00000490516 REG1AP05451 166 aa9.78□□□□□ -0.84
EXOSC3-207ENST00000490516 CRYGCP07315 174 aa9.78□□□□□ -0.84
EXOSC3-207ENST00000490516 RRASP10301 218 aa9.78□□□□□ -0.84
EXOSC3-207ENST00000490516 LEMD1Q68G75 181 aa9.78□□□□□ -0.84
EXOSC3-207ENST00000490516 C6orf223Q8N319 242 aa9.78□□□□□ -0.84
EXOSC3-207ENST00000490516 GBGT1Q8N5D6 347 aa9.78□□□□□ -0.84
EXOSC3-207ENST00000490516 CXorf58Q96LI9 332 aa9.78□□□□□ -0.84
EXOSC3-207ENST00000490516 C20orf24Q9BUV8 137 aa9.78□□□□□ -0.84
EXOSC3-207ENST00000490516 SLC2A9Q9NRM0 540 aa9.78□□□□□ -0.84
EXOSC3-207ENST00000490516 AASSQ9UDR5 926 aa9.78□□□□□ -0.84
EXOSC3-207ENST00000490516 IGLV11-55A0A075B6I3 123 aa9.77□□□□□ -0.85
EXOSC3-207ENST00000490516 CREBL2O60519 120 aaPredicted RBP9.77□□□□□ -0.85
EXOSC3-207ENST00000490516 KLK9Q2XQG4 91 aa9.77□□□□□ -0.85
EXOSC3-207ENST00000490516 OR10K2Q6IF99 312 aa9.77□□□□□ -0.85
EXOSC3-207ENST00000490516 KLK9Q9UKQ9 250 aa9.77□□□□□ -0.85
EXOSC3-207ENST00000490516 A0A1W2PPK0 400 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 LINC00473A8K010 186 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 J3QL48 77 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 TGOLN2O43493 480 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 DHFRP00374 187 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 CD3GP09693 182 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 DEFA4P12838 97 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 HIST1H1BP16401 226 aaKnown RBP9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 HTR2CP28335 458 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 RPL27AP46776 148 aaKnown RBP9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 RPS27AP62979 156 aaKnown RBP9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 VKORC1L1Q8N0U8 176 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 LYPD1Q8N2G4 141 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 OR6M1Q8NGM8 313 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 OSR1Q8TAX0 266 aaPredicted RBP9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 MYCBPQ99417 103 aaPredicted RBP9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 NICN1Q9BSH3 213 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 GABARAPL3Q9BY60 117 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 CLEC5AQ9NY25 188 aa9.76□□□□□ -0.85
EXOSC3-207ENST00000490516 CKLFQ9UBR5 152 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms