RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 SKA2Q8WVK7 121 aaPredicted RBP2.9□□□□□ -1.95
SSX2IP-208ENST00000490476 IMP4Q96G21 291 aaKnown RBP2.9□□□□□ -1.95
SSX2IP-208ENST00000490476 FAM19A4Q96LR4 140 aa2.9□□□□□ -1.95
SSX2IP-208ENST00000490476 AICDAQ9GZX7 198 aa2.9□□□□□ -1.95
SSX2IP-208ENST00000490476 OR51B5Q9H339 312 aa2.9□□□□□ -1.95
SSX2IP-208ENST00000490476 VAX2Q9UIW0 290 aa2.9□□□□□ -1.95
SSX2IP-208ENST00000490476 CFL2Q9Y281 166 aa2.9□□□□□ -1.95
SSX2IP-208ENST00000490476 USH2AO75445 5202 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 IGKV2-28A0A075B6P5 120 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 IGHV3-72A0A0B4J1Y9 119 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 IGHV7-4-1A0A0J9YVY3 117 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 PVALEFA0A1B0GWK0 134 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 C7orf66A4D0T2 115 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 CEACAM18A8MTB9 384 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 H3BSH0 61 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 TGOLN2O43493 480 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 MFSD11O43934 449 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 SC5DO75845 299 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 IGKV2D-28P01615 120 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 CLPSP04118 112 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 CXCR1P25024 350 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 SLC6A1P30531 599 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 CCR7P32248 378 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 HADHBP55084 474 aaKnown RBP2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 PLCXD2Q0VAA5 305 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 TMED2Q15363 201 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 RBM45Q8IUH3 476 aaKnown RBP2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 OR5T1Q8NG75 326 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 OR13G1Q8NGZ3 307 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 NT5CQ8TCD5 201 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 ALS2CR12Q96Q35 445 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 C20orf144Q9BQM9 153 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 EXOSC4Q9NPD3 245 aaKnown RBP2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 LRRC42Q9Y546 428 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 RFNGQ9Y644 331 aa2.89□□□□□ -1.95
SSX2IP-208ENST00000490476 IGLV4-60A0A075B6I1 120 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 IGHV3-49A0A0A0MS15 119 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 IGHV3-15A0A0B4J1V0 119 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 TRAV8-6A0A0B4J262 113 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 FAM240AA0A1B0GVK7 77 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 ANKRD20A5PA0PJZ0 165 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 J3QT63 122 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 PSPHP1O15172 72 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 PLIN3O60664 434 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 GATBO75879 557 aaKnown RBP2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 APOA1P02647 267 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 MUC1P15941 1255 aaPredicted RBP2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 PRKACBP22694 351 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 LCN1P31025 176 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 LINC00315P59091 139 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 BTN3A2P78410 334 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 DYNC1I2Q13409 638 aaKnown RBP2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 GPR176Q14439 515 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 PRSS8Q16651 343 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 TEX30Q5JUR7 227 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 C10orf99Q6UWK7 81 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 SYS1Q8N2H4 156 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 TCAIMQ8N3R3 496 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 OR52E4Q8NGH9 312 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 OR13C4Q8NGS5 318 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 OR9A2Q8NGT5 310 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 CDKL2Q92772 493 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 SLC25A46Q96AG3 418 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 PPWD1Q96BP3 646 aaKnown RBP2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 OR10C1Q96KK4 312 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 PEBP4Q96S96 227 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 RNF5Q99942 180 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 COPS4Q9BT78 406 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 FRMD8P1Q9BZ68 369 aaPredicted RBP2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 SYT4Q9H2B2 425 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 C21orf62Q9NYP8 219 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 MED11Q9P086 117 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 APLNQ9ULZ1 77 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 DSPPQ9NZW4 1301 aa2.88□□□□□ -1.95
SSX2IP-208ENST00000490476 IGLV2-18A0A075B6J9 118 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 A0A1B0GW15 77 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 KCNK1O00180 336 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 CCL22O00626 93 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 BET1O15155 118 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 CETN3O15182 167 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 CCDC22O60826 627 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 OR5AL1P0C617 328 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 PAX6P26367 422 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 RANBP1P43487 201 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 GPR4P46093 362 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 RGS6P49758 472 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 RAB13P51153 203 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 STX5Q13190 355 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 EIF4EBP1Q13541 118 aaPredicted RBP2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 VAMP3Q15836 100 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 LRRC75BQ2VPJ9 315 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 C5orf47Q569G3 176 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 HHATQ5VTY9 493 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 LRRC28Q86X40 367 aaPredicted RBP2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 ST13P4Q8IZP2 240 aaPredicted RBP2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 NECAP1Q8NC96 275 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 SLC26A10Q8NG04 563 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 OR1L1Q8NH94 360 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 ENKURQ8TC29 256 aa2.87□□□□□ -1.95
SSX2IP-208ENST00000490476 WDR34Q96EX3 536 aa2.87□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms