RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 TNFSF12O43508 249 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 DHFRP00374 187 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 PPYP01298 95 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 HSPB1P04792 205 aaKnown RBP7.09□□□□□ -1.27
HDAC6-232ENST00000489053 APELAP0DMC3 54 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 ZP3P21754 424 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 PRSS3P35030 304 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 RPS19P39019 145 aaKnown RBP7.09□□□□□ -1.27
HDAC6-232ENST00000489053 KRTAP10-11P60412 298 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 ERVK-16P61578 105 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 PJVKQ0ZLH3 352 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 FHL3Q13643 280 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 CDK10Q15131 360 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 PRSS8Q16651 343 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 TATDN3Q17R31 274 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 AADACL3Q5VUY0 350 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 MZT2AQ6P582 158 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 IDO2Q6ZQW0 420 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 ZNF429Q86V71 674 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 SLC25A42Q86VD7 318 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 ZBTB34Q8NCN2 500 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 OR5AP2Q8NGF4 316 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 MYOZ3Q8TDC0 251 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 SRSF12Q8WXF0 261 aaKnown RBP7.09□□□□□ -1.27
HDAC6-232ENST00000489053 SLC25A46Q96AG3 418 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 YIPF6Q96EC8 236 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 RSRP1Q9BUV0 290 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 ALX4Q9H161 411 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-232ENST00000489053 RANGRFQ9HD47 186 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-232ENST00000489053 HRASLSQ9HDD0 168 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 COMMD3Q9UBI1 195 aa7.09□□□□□ -1.27
HDAC6-232ENST00000489053 ZNF256Q9Y2P7 627 aaPredicted RBP7.09□□□□□ -1.27
HDAC6-232ENST00000489053 IGHV4OR15-8A0A075B7B6 117 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 A0A087WW49 117 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 IGKV1D-13A0A0B4J2D9 117 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 WI2-2373I1.2A0A1W2PRP0 233 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 ANKRD34BA5PLL1 514 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 FAM25AB3EWG3 89 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 FAM25CB3EWG5 89 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 FAM25GB3EWG6 89 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 SOX15O60248 233 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 NOL3O60936 208 aaKnown RBP7.08□□□□□ -1.28
HDAC6-232ENST00000489053 OR2A4O95047 310 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 IGLV2-23P01705 113 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 OR9G9P0C7N8 305 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 SAA1P0DJI8 122 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-232ENST00000489053 IGKV1-13P0DP09 117 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 EGR2P11161 476 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-232ENST00000489053 TGFBR1P36897 503 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 RORCP51449 518 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 SLURP1P55000 103 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 TAS2R20P59543 309 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 VBP1P61758 197 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 TSPAN5P62079 268 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 NCS1P62166 190 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 SSX9Q7RTT3 188 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 ANKRD13BQ86YJ7 626 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 CMTM1Q8IZ96 169 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 MFSD4AQ8N468 514 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 OR6Q1Q8NGQ2 317 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 DCUN1D4Q92564 292 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 C5orf30Q96GV9 206 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 USMG5Q96IX5 58 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 FYTTD1Q96QD9 318 aaKnown RBP7.08□□□□□ -1.28
HDAC6-232ENST00000489053 OR2A7Q96R45 310 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 FUNDC2Q9BWH2 189 aa7.08□□□□□ -1.28
HDAC6-232ENST00000489053 ZNF430Q9H8G1 570 aaPredicted RBP7.08□□□□□ -1.28
HDAC6-232ENST00000489053 SULT1C2O00338 296 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 CYB5BO43169 146 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 KBTBD11O94819 623 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 APOA1P02647 267 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 PMP2P02689 132 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 PTHLHP12272 177 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 DEFA4P12838 97 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 MAS1LP35410 378 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 ATP5G2Q06055 141 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 MSMO1Q15800 293 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 C19orf54Q5BKX5 351 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 OVCH2Q7RTZ1 564 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 GPR141Q7Z602 305 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 SNX29P2Q8IUI4 249 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 VKORC1L1Q8N0U8 176 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 SPAG16Q8N0X2 631 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 DMBX1Q8NFW5 382 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 OR51H1Q8NH63 302 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 CD300LFQ8TDQ1 290 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 DDB2Q92466 427 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 DLX4Q92988 240 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-232ENST00000489053 RHOVQ96L33 236 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 PRR25Q96S07 402 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 TINAGL1Q9GZM7 467 aaPredicted RBP7.07□□□□□ -1.28
HDAC6-232ENST00000489053 CCL28Q9NRJ3 127 aa7.07□□□□□ -1.28
HDAC6-232ENST00000489053 FAM223BA6NKX1 122 aa7.06□□□□□ -1.28
HDAC6-232ENST00000489053 SRRM4A7MD48 611 aaKnown RBP7.06□□□□□ -1.28
HDAC6-232ENST00000489053 IFNA6P05013 189 aa7.06□□□□□ -1.28
HDAC6-232ENST00000489053 CRYGBP07316 175 aa7.06□□□□□ -1.28
HDAC6-232ENST00000489053 HLA-DMAP28067 261 aa7.06□□□□□ -1.28
HDAC6-232ENST00000489053 RPL27AP46776 148 aaKnown RBP7.06□□□□□ -1.28
HDAC6-232ENST00000489053 RPL30P62888 115 aaKnown RBP7.06□□□□□ -1.28
HDAC6-232ENST00000489053 RPL8P62917 257 aaKnown RBP7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms