RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 TCTAP57738 103 aa14.96□□□□□ -0.01
PDLIM1-202ENST00000477757 CLEC19AQ6UXS0 136 aa14.96□□□□□ -0.01
PDLIM1-202ENST00000477757 RBPMS2Q6ZRY4 209 aaKnown RBP14.96□□□□□ -0.01
PDLIM1-202ENST00000477757 SLC38A6Q8IZM9 456 aa14.96□□□□□ -0.01
PDLIM1-202ENST00000477757 OSR1Q8TAX0 266 aaPredicted RBP14.96□□□□□ -0.01
PDLIM1-202ENST00000477757 MARC2Q969Z3 335 aa14.96□□□□□ -0.01
PDLIM1-202ENST00000477757 SPAG8Q99932 426 aaPredicted RBP14.96□□□□□ -0.01
PDLIM1-202ENST00000477757 MFFQ9GZY8 342 aa14.96□□□□□ -0.01
PDLIM1-202ENST00000477757 LPAR5Q9H1C0 372 aa14.96□□□□□ -0.01
PDLIM1-202ENST00000477757 TRDCB7Z8K6 153 aa14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 IGHV3-23P01764 117 aa14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 CD1AP06126 327 aa14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 SAA1P0DJI8 122 aaPredicted RBP14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 CTRB1P17538 263 aa14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 MED21Q13503 144 aa14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 TPBGQ13641 420 aa14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 CDK10Q15131 360 aa14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 RBMS2Q15434 407 aaKnown RBP14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 CTRB2Q6GPI1 263 aa14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 C19orf35Q6ZS72 473 aa14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 MMD2Q8IY49 270 aa14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 OR4A4PQ8NGN8 299 aa14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 ADTRPQ96IZ2 230 aa14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 UBQLN2Q9UHD9 624 aa14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 HSF4Q9ULV5 492 aa14.95□□□□□ -0.02
PDLIM1-202ENST00000477757 NPIPB5A8MRT5 1133 aa14.94□□□□□ -0.02
PDLIM1-202ENST00000477757 FOXI3A8MTJ6 420 aaPredicted RBP14.94□□□□□ -0.02
PDLIM1-202ENST00000477757 TEX22C9J3V5 150 aa14.94□□□□□ -0.02
PDLIM1-202ENST00000477757 BPNT1O95861 308 aa14.94□□□□□ -0.02
PDLIM1-202ENST00000477757 NANOS2P60321 138 aaKnown RBP14.94□□□□□ -0.02
PDLIM1-202ENST00000477757 ODF3L2Q3SX64 289 aa14.94□□□□□ -0.02
PDLIM1-202ENST00000477757 UNQ9165/PRO28630Q6UXU0 137 aa14.94□□□□□ -0.02
PDLIM1-202ENST00000477757 LRRTM1Q86UE6 522 aa14.94□□□□□ -0.02
PDLIM1-202ENST00000477757 C11orf68Q9H3H3 251 aaKnown RBP14.94□□□□□ -0.02
PDLIM1-202ENST00000477757 MUC4Q99102 2169 aa14.93□□□□□ -0.02
PDLIM1-202ENST00000477757 CELP19835 753 aa14.93□□□□□ -0.02
PDLIM1-202ENST00000477757 FCGR2BP31994 310 aaPredicted RBP14.93□□□□□ -0.02
PDLIM1-202ENST00000477757 FAM89BQ8N5H3 189 aa14.93□□□□□ -0.02
PDLIM1-202ENST00000477757 C11orf45Q8TAV5 145 aa14.93□□□□□ -0.02
PDLIM1-202ENST00000477757 C2CD4CQ8TF44 421 aa14.93□□□□□ -0.02
PDLIM1-202ENST00000477757 PHYHIPQ92561 330 aa14.93□□□□□ -0.02
PDLIM1-202ENST00000477757 TMEM80Q96HE8 168 aa14.93□□□□□ -0.02
PDLIM1-202ENST00000477757 FANCD2OSQ96PS1 177 aa14.93□□□□□ -0.02
PDLIM1-202ENST00000477757 URM1Q9BTM9 101 aaKnown RBP14.93□□□□□ -0.02
PDLIM1-202ENST00000477757 CABLES2Q9BTV7 478 aa14.93□□□□□ -0.02
PDLIM1-202ENST00000477757 MAP6D1Q9H9H5 199 aa14.93□□□□□ -0.02
PDLIM1-202ENST00000477757 FBXL17Q9UF56 701 aa14.93□□□□□ -0.02
PDLIM1-202ENST00000477757 S4R3C0 116 aa14.93□□□□□ -0.02
PDLIM1-202ENST00000477757 HMX3A6NHT5 357 aa14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 LINC00473A8K010 186 aa14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 BET1O15155 118 aa14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 FABP7O15540 132 aa14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 CIB2O75838 187 aa14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 IFNA4P05014 189 aa14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 CD3GP09693 182 aa14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 GALP22466 123 aa14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 DUTP33316 252 aaKnown RBP14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 RASSF2P50749 326 aa14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 MED22Q15528 200 aa14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 EEF1AKMT3Q96AZ1 226 aa14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 CMSS1Q9BQ75 279 aaKnown RBP14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 C9orf16Q9BUW7 83 aa14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 C5orf66Q9H5L9 145 aa14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 MRPL27Q9P0M9 148 aaKnown RBP14.92□□□□□ -0.02
PDLIM1-202ENST00000477757 TSPAN4O14817 238 aa14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 S1PR2O95136 353 aa14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 DIRAS3O95661 229 aa14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 RPL35AP18077 110 aaKnown RBP14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 TMEM50BP56557 158 aa14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 INSL4Q14641 139 aa14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 KLK9Q2XQG4 91 aa14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 ZNF585BQ52M93 769 aa14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 IGSF11Q5DX21 431 aa14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 OR6M1Q8NGM8 313 aa14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 OR10J5Q8NHC4 309 aa14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 GALNT14Q96FL9 552 aa14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 ARHGAP5-AS1Q96IT6 56 aa14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 KLK9Q9UKQ9 250 aa14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 PKD1P98161 4303 aa14.91□□□□□ -0.02
PDLIM1-202ENST00000477757 TRBV6-7A0A0A0MS04 114 aa14.9□□□□□ -0.02
PDLIM1-202ENST00000477757 DPPA5A6NC42 116 aa14.9□□□□□ -0.02
PDLIM1-202ENST00000477757 CD37P11049 281 aa14.9□□□□□ -0.02
PDLIM1-202ENST00000477757 ELLP55199 621 aaPredicted RBP14.9□□□□□ -0.02
PDLIM1-202ENST00000477757 RBM48Q5RL73 367 aaKnown RBP14.9□□□□□ -0.02
PDLIM1-202ENST00000477757 GVQW1Q8N7I0 195 aa14.9□□□□□ -0.02
PDLIM1-202ENST00000477757 FYTTD1Q96QD9 318 aaKnown RBP14.9□□□□□ -0.02
PDLIM1-202ENST00000477757 PECRQ9BY49 303 aa14.9□□□□□ -0.02
PDLIM1-202ENST00000477757 UFC1Q9Y3C8 167 aa14.9□□□□□ -0.02
PDLIM1-202ENST00000477757 EFCAB10A6NFE3 127 aa14.89□□□□□ -0.03
PDLIM1-202ENST00000477757 CRYGCP07315 174 aa14.89□□□□□ -0.03
PDLIM1-202ENST00000477757 IL6RP08887 468 aaPredicted RBP14.89□□□□□ -0.03
PDLIM1-202ENST00000477757 PSMB6P28072 239 aa14.89□□□□□ -0.03
PDLIM1-202ENST00000477757 ZFP1Q6P2D0 407 aa14.89□□□□□ -0.03
PDLIM1-202ENST00000477757 SLC2A9Q9NRM0 540 aa14.89□□□□□ -0.03
PDLIM1-202ENST00000477757 APLNQ9ULZ1 77 aa14.89□□□□□ -0.03
PDLIM1-202ENST00000477757 TRBV7-1A0A0A6YYK4 115 aa14.88□□□□□ -0.03
PDLIM1-202ENST00000477757 A0A1B0GW64 132 aa14.88□□□□□ -0.03
PDLIM1-202ENST00000477757 DHFRP00374 187 aa14.88□□□□□ -0.03
PDLIM1-202ENST00000477757 GSTT2P0CG29 244 aa14.88□□□□□ -0.03
PDLIM1-202ENST00000477757 GSTT2BP0CG30 244 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms