RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 ZNF680Q8NEM1 530 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 OR2T27Q8NH04 317 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 OR52N1Q8NH53 320 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 ITLN2Q8WWU7 325 aaPredicted RBP2.78□□□□□ -1.96
VPS13D-207ENST00000476169 RAD51AP1Q96B01 352 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 BORCS7Q96B45 105 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 CPNE2Q96FN4 548 aaPredicted RBP2.78□□□□□ -1.96
VPS13D-207ENST00000476169 OR2V2Q96R30 315 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 TSSK6Q9BXA6 273 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 PCBD2Q9H0N5 130 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 ZNF430Q9H8G1 570 aaPredicted RBP2.78□□□□□ -1.96
VPS13D-207ENST00000476169 ARMC1Q9NVT9 282 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 RPS6KB2Q9UBS0 482 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 VPREB3Q9UKI3 123 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 HHLA2Q9UM44 414 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 SMAD5-AS1Q9Y6J3 95 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 RGPD2P0DJD1 1756 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 EP400Q96L91 3159 aa2.78□□□□□ -1.96
VPS13D-207ENST00000476169 SRCAPQ6ZRS2 3230 aa2.78□□□□□ -1.97
VPS13D-207ENST00000476169 LRP4O75096 1905 aa2.78□□□□□ -1.97
VPS13D-207ENST00000476169 RGPD5Q99666 1765 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-207ENST00000476169 A0A1B0GV72 72 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 GOLGA6L4A6NEF3 574 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 OR6C6A6NF89 314 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 OR4C46A6NHA9 309 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 PDE6DO43924 150 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 LTAP01374 205 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 SERPINA7P05543 415 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 ESDP10768 282 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 ELK1P19419 428 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 CA7P43166 264 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 TAS2R41P59536 307 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 C5orf46Q6UWT4 87 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 BAP18Q8IXM2 172 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 ZNF101Q8IZC7 436 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 DEFB125Q8N687 156 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-207ENST00000476169 FER1L6-AS1Q8NA97 138 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 LY6G5BQ8NDX9 201 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 OR2D3Q8NGH3 330 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 KCTD4Q8WVF5 259 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 PEBP4Q96S96 227 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 PLA2G12AQ9BZM1 189 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 CXorf21Q9HAI6 301 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 C8orf4Q9NR00 106 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 ANGPT4Q9Y264 503 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 CARHSP1Q9Y2V2 147 aaKnown RBP2.77□□□□□ -1.97
VPS13D-207ENST00000476169 UTP11Q9Y3A2 253 aaKnown RBP2.77□□□□□ -1.97
VPS13D-207ENST00000476169 KIF25-AS1Q9Y6Z4 181 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 GTF3C1Q12789 2109 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 RGPD3A6NKT7 1758 aaPredicted RBP2.77□□□□□ -1.97
VPS13D-207ENST00000476169 RGPD4Q7Z3J3 1758 aa2.77□□□□□ -1.97
VPS13D-207ENST00000476169 C4AP0C0L4 1744 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 IZUMO1RA6ND01 250 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 OR5H14A6NHG9 310 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 LEUTXA8MZ59 168 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 M0R381 172 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 GSTZ1O43708 216 aaPredicted RBP2.76□□□□□ -1.97
VPS13D-207ENST00000476169 OR7C2O60412 319 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 CCNE2O96020 404 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 TTRP02766 147 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 GYPCP04921 128 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 GUSBP08236 651 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 OR5AC1P0C628 307 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 FGF6P10767 208 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 CNTFRP26992 372 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 RPL5P46777 297 aaKnown RBP2.76□□□□□ -1.97
VPS13D-207ENST00000476169 CRYBA4P53673 196 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 DEFA1P59665 94 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 MOGQ16653 247 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 LPCAT3Q6P1A2 487 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 C3orf33Q6P1S2 294 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 ALKAL1Q6UXT8 129 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 TMEM144Q7Z5S9 345 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 AMN1Q8IY45 258 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 MKXQ8IYA7 352 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 C20orf196Q8IYI0 205 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 C1orf158Q8N1D5 194 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 ANKRD29Q8N6D5 301 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 ZNF433Q8N7K0 673 aaPredicted RBP2.76□□□□□ -1.97
VPS13D-207ENST00000476169 OR51A2Q8NGJ7 313 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 OR4X1Q8NH49 305 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 LHFPL5Q8TAF8 219 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 MAL2Q969L2 176 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 C12orf43Q96C57 262 aaKnown RBP2.76□□□□□ -1.97
VPS13D-207ENST00000476169 LINC00477Q96M19 166 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 SHANK2-AS3Q9BTD1 123 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 GABARAPL1Q9H0R8 117 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 BATF3Q9NR55 127 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 PRR34Q9NV39 138 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 CMTM6Q9NX76 183 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 ZNF492Q9P255 531 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 ZNF230Q9UIE0 474 aaPredicted RBP2.76□□□□□ -1.97
VPS13D-207ENST00000476169 TBX21Q9UL17 535 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 LY75O60449 1722 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 LTBP1Q14766 1721 aa2.76□□□□□ -1.97
VPS13D-207ENST00000476169 TNRC6CQ9HCJ0 1690 aaKnown RBP2.76□□□□□ -1.97
VPS13D-207ENST00000476169 DUOX1Q9NRD9 1551 aa2.75□□□□□ -1.97
VPS13D-207ENST00000476169 KNCNA6PVL3 124 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms