RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 ZNF585BQ52M93 769 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 MZT2BQ6NZ67 158 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 CADM3Q8N126 398 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 TEX45Q8NA69 505 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 VSTM2AQ8TAG5 236 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 TMEM230Q96A57 120 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 NAA60Q9H7X0 242 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 MMP24Q9Y5R2 645 aa12.7□□□□□ -0.38
GPC1-207ENST00000466624 PEX14O75381 377 aa12.69□□□□□ -0.38
GPC1-207ENST00000466624 NQO2P16083 231 aa12.69□□□□□ -0.38
GPC1-207ENST00000466624 DEFA1P59665 94 aa12.69□□□□□ -0.38
GPC1-207ENST00000466624 DEFA3P59666 94 aa12.69□□□□□ -0.38
GPC1-207ENST00000466624 UBE2MP61081 183 aaKnown RBP12.69□□□□□ -0.38
GPC1-207ENST00000466624 FOXL1Q12952 345 aa12.69□□□□□ -0.38
GPC1-207ENST00000466624 SGPP2Q8IWX5 399 aa12.69□□□□□ -0.38
GPC1-207ENST00000466624 CENPSQ8N2Z9 138 aa12.69□□□□□ -0.38
GPC1-207ENST00000466624 GALNT14Q96FL9 552 aa12.69□□□□□ -0.38
GPC1-207ENST00000466624 FBXL15Q9H469 300 aa12.69□□□□□ -0.38
GPC1-207ENST00000466624 PALMDQ9NP74 551 aa12.69□□□□□ -0.38
GPC1-207ENST00000466624 METTL1Q9UBP6 276 aaKnown RBP12.69□□□□□ -0.38
GPC1-207ENST00000466624 SIGLEC9Q9Y336 463 aa12.69□□□□□ -0.38
GPC1-207ENST00000466624 TEX13DA0A0J9YY54 714 aaPredicted RBP12.68□□□□□ -0.38
GPC1-207ENST00000466624 KCNAB3O43448 404 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 SLC25A17O43808 307 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 S1PR2O95136 353 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 IGHG2P01859 326 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 SERPINE2P07093 398 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 SAA1P0DJI8 122 aaPredicted RBP12.68□□□□□ -0.38
GPC1-207ENST00000466624 UCP1P25874 307 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 LPAR6P43657 344 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 DHODHQ02127 395 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 PLGLAQ15195 96 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 TMEM128Q5BJH2 165 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 LIN54Q6MZP7 749 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 PPP1R27Q86WC6 154 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 PUSL1Q8N0Z8 303 aaKnown RBP12.68□□□□□ -0.38
GPC1-207ENST00000466624 ADAD2Q8NCV1 583 aaKnown RBP12.68□□□□□ -0.38
GPC1-207ENST00000466624 OR2T6Q8NHC8 308 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 LINC01006Q8NI28 216 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 RHOVQ96L33 236 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 TP53RKQ96S44 253 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 C19orf24Q9BVV8 132 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 BEX1Q9HBH7 125 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 KCNIP3Q9Y2W7 256 aa12.68□□□□□ -0.38
GPC1-207ENST00000466624 CREBL2O60519 120 aaPredicted RBP12.67□□□□□ -0.38
GPC1-207ENST00000466624 TCRBP04435 133 aa12.67□□□□□ -0.38
GPC1-207ENST00000466624 FGF2P09038 288 aa12.67□□□□□ -0.38
GPC1-207ENST00000466624 AKR1C4P17516 323 aa12.67□□□□□ -0.38
GPC1-207ENST00000466624 COMPP49747 757 aaPredicted RBP12.67□□□□□ -0.38
GPC1-207ENST00000466624 TMED4Q7Z7H5 227 aa12.67□□□□□ -0.38
GPC1-207ENST00000466624 SLC25A42Q86VD7 318 aa12.67□□□□□ -0.38
GPC1-207ENST00000466624 OR4A5Q8NH83 315 aa12.67□□□□□ -0.38
GPC1-207ENST00000466624 R3HDM4Q96D70 268 aa12.67□□□□□ -0.38
GPC1-207ENST00000466624 TMEM222Q9H0R3 208 aa12.67□□□□□ -0.38
GPC1-207ENST00000466624 BET1LQ9NYM9 111 aa12.67□□□□□ -0.38
GPC1-207ENST00000466624 ZNF580Q9UK33 172 aa12.67□□□□□ -0.38
GPC1-207ENST00000466624 FAM240BA0A1B0GVZ2 78 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 CLPSL1A2RUU4 121 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 MARCH11A6NNE9 402 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 PLXNB1O43157 2135 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 ATG12O94817 140 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 KBTBD11O94819 623 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 OR2A4O95047 310 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 IL6RP08887 468 aaPredicted RBP12.66□□□□□ -0.38
GPC1-207ENST00000466624 OR5AC1P0C628 307 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 ANXA3P12429 323 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 SUPT4H1P63272 117 aaKnown RBP12.66□□□□□ -0.38
GPC1-207ENST00000466624 C9orf152Q5JTZ5 239 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 ZNF562Q6V9R5 426 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 Q6ZS46 218 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 SLC35E3Q7Z769 313 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 TMEM167AQ8TBQ9 72 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 GLYATL2Q8WU03 294 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 OR2A7Q96R45 310 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 C20orf85Q9H1P6 137 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 SERTAD4Q9NUC0 356 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 TNCP24821 2201 aa12.66□□□□□ -0.38
GPC1-207ENST00000466624 IGHV7-81A0A0B4J1V7 117 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 PIGBOS1A0A0B4J2F0 54 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 SH2D7A6NKC9 451 aaPredicted RBP12.65□□□□□ -0.38
GPC1-207ENST00000466624 ARPC1BO15143 372 aaKnown RBP12.65□□□□□ -0.38
GPC1-207ENST00000466624 CDS2O95674 445 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 IGKV1-39P01597 117 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 IGKV1D-39P04432 117 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 VDAC2P45880 294 aaPredicted RBP12.65□□□□□ -0.38
GPC1-207ENST00000466624 ERVK-16P61578 105 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 PRSS8Q16651 343 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 MRGPRG-AS1Q2M3A8 158 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 ARSJQ5FYB0 599 aaPredicted RBP12.65□□□□□ -0.38
GPC1-207ENST00000466624 OR4A47Q6IF82 309 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 MMD2Q8IY49 270 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 VKORC1L1Q8N0U8 176 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 DUSP18Q8NEJ0 188 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 ENKURQ8TC29 256 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 TAF15Q92804 592 aaKnown RBP eCLIP12.65□□□□□ -0.38
GPC1-207ENST00000466624 IL22RA2Q969J5 263 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 SEC22AQ96IW7 307 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 TMEM56Q96MV1 263 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 HSPB9Q9BQS6 159 aa12.65□□□□□ -0.38
GPC1-207ENST00000466624 ALX4Q9H161 411 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms