RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 C6orf62Q9GZU0 229 aaPredicted RBP12.37□□□□□ -0.43
ERCC3-206ENST00000462306 FXYD6Q9H0Q3 95 aa12.37□□□□□ -0.43
ERCC3-206ENST00000462306 NOTCH1P46531 2555 aa12.37□□□□□ -0.43
ERCC3-206ENST00000462306 MEGF8Q7Z7M0 2845 aa12.37□□□□□ -0.43
ERCC3-206ENST00000462306 CCDC160A6NGH7 325 aa12.36□□□□□ -0.43
ERCC3-206ENST00000462306 M0QYG6 137 aa12.36□□□□□ -0.43
ERCC3-206ENST00000462306 TSPAN5P62079 268 aa12.36□□□□□ -0.43
ERCC3-206ENST00000462306 GNB1P62873 340 aa12.36□□□□□ -0.43
ERCC3-206ENST00000462306 DGCR2P98153 550 aa12.36□□□□□ -0.43
ERCC3-206ENST00000462306 TMEM267Q0VDI3 215 aaPredicted RBP12.36□□□□□ -0.43
ERCC3-206ENST00000462306 TCTEX1D1Q8N7M0 179 aa12.36□□□□□ -0.43
ERCC3-206ENST00000462306 MCFD2Q8NI22 146 aa12.36□□□□□ -0.43
ERCC3-206ENST00000462306 GRPEL2Q8TAA5 225 aa12.36□□□□□ -0.43
ERCC3-206ENST00000462306 FCAMRQ8WWV6 532 aa12.36□□□□□ -0.43
ERCC3-206ENST00000462306 RSL24D1Q9UHA3 163 aaKnown RBP12.36□□□□□ -0.43
ERCC3-206ENST00000462306 FOXA2Q9Y261 457 aaPredicted RBP12.36□□□□□ -0.43
ERCC3-206ENST00000462306 A0A1W2PN81 502 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 NUDT19A8MXV4 375 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 GABARAPH6UMI1 98 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 ZNF701M0R085 212 aaPredicted RBP12.35□□□□□ -0.43
ERCC3-206ENST00000462306 RBFOX2O43251 390 aaKnown RBP eCLIP12.35□□□□□ -0.43
ERCC3-206ENST00000462306 RAMP3O60896 148 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 CNIH1O95406 144 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 PF4P02776 101 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 CD3DP04234 171 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 TNFSF8P32971 234 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 CHRNA7P36544 502 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 KIR2DS2P43631 304 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 RAB9AP51151 201 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 MRPS10P82664 201 aaKnown RBP12.35□□□□□ -0.43
ERCC3-206ENST00000462306 ACTBL2Q562R1 376 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 PYHIN1Q6K0P9 492 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 TMEM65Q6PI78 240 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 UNQ5815/PRO19632Q6UWF5 114 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 VKORC1L1Q8N0U8 176 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 SPAG16Q8N0X2 631 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 ZNF491Q8N8L2 437 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 BORCS5Q969J3 196 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 SOSTQ9BQB4 213 aa12.35□□□□□ -0.43
ERCC3-206ENST00000462306 TINAGL1Q9GZM7 467 aaPredicted RBP12.35□□□□□ -0.43
ERCC3-206ENST00000462306 ZNF430Q9H8G1 570 aaPredicted RBP12.35□□□□□ -0.43
ERCC3-206ENST00000462306 CTDSPLO15194 276 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 PGLYRP1O75594 196 aaPredicted RBP12.34□□□□□ -0.43
ERCC3-206ENST00000462306 TBPP20226 339 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 CATR1Q13166 79 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 ASPHD1Q5U4P2 390 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 AADACL3Q5VUY0 350 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 PUSL1Q8N0Z8 303 aaKnown RBP12.34□□□□□ -0.43
ERCC3-206ENST00000462306 LINC00482Q8N8I6 264 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 OR5M8Q8NGP6 311 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 OR51H1Q8NH63 302 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 CASTOR1Q8WTX7 329 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 SMIM4Q8WVI0 70 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 RAX2Q96IS3 184 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 RHOVQ96L33 236 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 UBE2E2Q96LR5 201 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 P2RX4Q99571 388 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 RABL2AQ9UBK7 228 aaPredicted RBP12.34□□□□□ -0.43
ERCC3-206ENST00000462306 RABL2BQ9UNT1 228 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 TNCP24821 2201 aa12.34□□□□□ -0.43
ERCC3-206ENST00000462306 NOTCH3Q9UM47 2321 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 G3V4G9 280 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 GPR31O00270 319 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 CD74P04233 296 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 MYCNOSP40205 109 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 UCP3P55916 312 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 SSBP1Q04837 148 aaKnown RBP12.33□□□□□ -0.44
ERCC3-206ENST00000462306 IL18Q14116 193 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 TNXAQ16473 311 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 RNASE10Q5GAN6 216 aaKnown RBP12.33□□□□□ -0.44
ERCC3-206ENST00000462306 SAMD5Q5TGI4 173 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 LHFPL1Q86WI0 220 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 C1QL4Q86Z23 238 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 MRPL41Q8IXM3 137 aaKnown RBP12.33□□□□□ -0.44
ERCC3-206ENST00000462306 TMEM229BQ8NBD8 167 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 TMEM167AQ8TBQ9 72 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 C4orf3Q8WVX3 66 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 DUX3Q96PT4 197 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 RSRP1Q9BUV0 290 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 GNB4Q9HAV0 340 aa12.33□□□□□ -0.44
ERCC3-206ENST00000462306 MSGN1A6NI15 193 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 CCL24O00175 119 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 KBTBD11O94819 623 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 OR2A4O95047 310 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 HPRT1P00492 218 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 HRASP01112 189 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 RLN1P04808 185 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 CD33P20138 364 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 TAS2R19P59542 299 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 DEFB136Q30KP8 78 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 LPCAT3Q6P1A2 487 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 MMD2Q8IY49 270 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 CMTM1Q8IZ96 169 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 ARRDC1Q8N5I2 433 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 OR4D10Q8NGI6 311 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 VSTM2AQ8TAG5 236 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 CD300LFQ8TDQ1 290 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 SRSF12Q8WXF0 261 aaKnown RBP12.32□□□□□ -0.44
ERCC3-206ENST00000462306 TMEM68Q96MH6 324 aa12.32□□□□□ -0.44
ERCC3-206ENST00000462306 OR2A7Q96R45 310 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 116.3 ms