RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 C17orf100A8MU93 164 aa8.81□□□□□ -1
PKP4-206ENST00000452162 OVOL3O00110 214 aa8.81□□□□□ -1
PKP4-206ENST00000452162 PPIHO43447 177 aaKnown RBP8.81□□□□□ -1
PKP4-206ENST00000452162 SNAPINO95295 136 aa8.81□□□□□ -1
PKP4-206ENST00000452162 IFNA5P01569 189 aa8.81□□□□□ -1
PKP4-206ENST00000452162 NPBWR1P48145 328 aa8.81□□□□□ -1
PKP4-206ENST00000452162 ZNF134P52741 427 aa8.81□□□□□ -1
PKP4-206ENST00000452162 UTF1Q5T230 341 aa8.81□□□□□ -1
PKP4-206ENST00000452162 SPSB3Q6PJ21 355 aa8.81□□□□□ -1
PKP4-206ENST00000452162 TMEM14EPQ6UXP3 125 aa8.81□□□□□ -1
PKP4-206ENST00000452162 LFNGQ8NES3 379 aa8.81□□□□□ -1
PKP4-206ENST00000452162 CD300LFQ8TDQ1 290 aa8.81□□□□□ -1
PKP4-206ENST00000452162 ZNF665Q9H7R5 613 aa8.81□□□□□ -1
PKP4-206ENST00000452162 DSCAML1Q8TD84 2053 aa8.81□□□□□ -1
PKP4-206ENST00000452162 KBTBD11-OT1A0A1B0GTJ5 212 aa8.81□□□□□ -1
PKP4-206ENST00000452162 SLC31A2O15432 143 aa8.81□□□□□ -1
PKP4-206ENST00000452162 GYPAP02724 150 aa8.81□□□□□ -1
PKP4-206ENST00000452162 PEA15Q15121 130 aa8.81□□□□□ -1
PKP4-206ENST00000452162 SPANXN5Q5MJ07 72 aa8.81□□□□□ -1
PKP4-206ENST00000452162 H2BFWTQ7Z2G1 175 aa8.81□□□□□ -1
PKP4-206ENST00000452162 DEFB108BQ8NET1 73 aa8.81□□□□□ -1
PKP4-206ENST00000452162 PERPQ96FX8 193 aa8.81□□□□□ -1
PKP4-206ENST00000452162 CCL13Q99616 98 aa8.81□□□□□ -1
PKP4-206ENST00000452162 PARD6GQ9BYG4 376 aaPredicted RBP8.81□□□□□ -1
PKP4-206ENST00000452162 HIPK2Q9H2X6 1198 aa8.81□□□□□ -1
PKP4-206ENST00000452162 RAB9BQ9NP90 201 aa8.81□□□□□ -1
PKP4-206ENST00000452162 GFOD1Q9NXC2 390 aa8.81□□□□□ -1
PKP4-206ENST00000452162 CLN8Q9UBY8 286 aa8.81□□□□□ -1
PKP4-206ENST00000452162 GAB2Q9UQC2 676 aa8.81□□□□□ -1
PKP4-206ENST00000452162 NDUFS7O75251 213 aa8.8□□□□□ -1
PKP4-206ENST00000452162 OR8U8P0C7N1 319 aa8.8□□□□□ -1
PKP4-206ENST00000452162 IRF2P14316 349 aa8.8□□□□□ -1
PKP4-206ENST00000452162 TNFRSF1AP19438 455 aa8.8□□□□□ -1
PKP4-206ENST00000452162 HBG1P69891 147 aa8.8□□□□□ -1
PKP4-206ENST00000452162 HBG2P69892 147 aa8.8□□□□□ -1
PKP4-206ENST00000452162 CCL8P80075 99 aa8.8□□□□□ -1
PKP4-206ENST00000452162 DPPA3Q6W0C5 159 aa8.8□□□□□ -1
PKP4-206ENST00000452162 THNSL2Q86YJ6 484 aa8.8□□□□□ -1
PKP4-206ENST00000452162 FAM216BQ8N7L0 139 aa8.8□□□□□ -1
PKP4-206ENST00000452162 OR4C12Q96R67 309 aa8.8□□□□□ -1
PKP4-206ENST00000452162 LINC00574Q9H8X3 128 aa8.8□□□□□ -1
PKP4-206ENST00000452162 BEX4Q9NWD9 120 aaPredicted RBP8.8□□□□□ -1
PKP4-206ENST00000452162 DYSFO75923 2080 aa8.8□□□□□ -1
PKP4-206ENST00000452162 ACANP16112 2415 aa8.8□□□□□ -1
PKP4-206ENST00000452162 TRGV10A0A0A0MS01 117 aa8.8□□□□□ -1
PKP4-206ENST00000452162 MARCH11A6NNE9 402 aa8.8□□□□□ -1
PKP4-206ENST00000452162 B9A039 149 aa8.8□□□□□ -1
PKP4-206ENST00000452162 M0R1X1 148 aa8.8□□□□□ -1
PKP4-206ENST00000452162 RBFOX2O43251 390 aaKnown RBP eCLIP8.8□□□□□ -11e-8■□□□□ 10.8
PKP4-206ENST00000452162 PPT1P50897 306 aa8.8□□□□□ -1
PKP4-206ENST00000452162 CCL20P78556 96 aa8.8□□□□□ -1
PKP4-206ENST00000452162 EFNB3Q15768 340 aa8.8□□□□□ -1
PKP4-206ENST00000452162 AARDQ4LEZ3 155 aa8.8□□□□□ -1
PKP4-206ENST00000452162 RPL39P5Q59GN2 51 aa8.8□□□□□ -1
PKP4-206ENST00000452162 AKR1C8PQ5T2L2 129 aa8.8□□□□□ -1
PKP4-206ENST00000452162 DHRS7BQ6IAN0 325 aaPredicted RBP8.8□□□□□ -1
PKP4-206ENST00000452162 CORO2AQ92828 525 aa8.8□□□□□ -1
PKP4-206ENST00000452162 R3HDM4Q96D70 268 aa8.8□□□□□ -1
PKP4-206ENST00000452162 FBXO7Q9Y3I1 522 aa8.8□□□□□ -1
PKP4-206ENST00000452162 KPTNQ9Y664 436 aa8.8□□□□□ -1
PKP4-206ENST00000452162 TANC2Q9HCD6 1990 aa8.8□□□□□ -1
PKP4-206ENST00000452162 A0A1B0GV50 99 aa8.79□□□□□ -1
PKP4-206ENST00000452162 BTBD17A6NE02 478 aa8.79□□□□□ -1
PKP4-206ENST00000452162 GPR37O15354 613 aa8.79□□□□□ -1
PKP4-206ENST00000452162 FCGR3BO75015 233 aa8.79□□□□□ -1
PKP4-206ENST00000452162 IGHV3-7P01780 117 aa8.79□□□□□ -1
PKP4-206ENST00000452162 RAB7AP51149 207 aa8.79□□□□□ -1
PKP4-206ENST00000452162 SLC38A11Q08AI6 406 aa8.79□□□□□ -1
PKP4-206ENST00000452162 LRRC75BQ2VPJ9 315 aa8.79□□□□□ -1
PKP4-206ENST00000452162 CT45A1Q5HYN5 189 aa8.79□□□□□ -1
PKP4-206ENST00000452162 SLC25A24Q6NUK1 477 aa8.79□□□□□ -1
PKP4-206ENST00000452162 C1orf229Q6ZS94 237 aaPredicted RBP8.79□□□□□ -1
PKP4-206ENST00000452162 ZCCHC24Q8N2G6 241 aaKnown RBP8.79□□□□□ -1
PKP4-206ENST00000452162 ZNF439Q8NDP4 499 aa8.79□□□□□ -1
PKP4-206ENST00000452162 CT45A3Q8NHU0 189 aa8.79□□□□□ -1
PKP4-206ENST00000452162 SCGB1C1Q8TD33 95 aa8.79□□□□□ -1
PKP4-206ENST00000452162 DDB2Q92466 427 aa8.79□□□□□ -1
PKP4-206ENST00000452162 FOXC2Q99958 501 aa8.79□□□□□ -1
PKP4-206ENST00000452162 PSMG3Q9BT73 122 aaPredicted RBP8.79□□□□□ -1
PKP4-206ENST00000452162 RSG1Q9BU20 258 aa8.79□□□□□ -1
PKP4-206ENST00000452162 PBDC1Q9BVG4 233 aa8.79□□□□□ -1
PKP4-206ENST00000452162 EIF5A2Q9GZV4 153 aaKnown RBP8.79□□□□□ -1
PKP4-206ENST00000452162 FLNAP21333 2647 aaKnown RBP8.79□□□□□ -1
PKP4-206ENST00000452162 ZNF729A6NN14 1252 aaPredicted RBP8.79□□□□□ -1
PKP4-206ENST00000452162 FAM90A9PA6NNJ1 464 aa8.79□□□□□ -1
PKP4-206ENST00000452162 PMS2P5A8MQ11 134 aa8.79□□□□□ -1
PKP4-206ENST00000452162 VSTM5A8MXK1 200 aa8.79□□□□□ -1
PKP4-206ENST00000452162 HPRT1P00492 218 aa8.79□□□□□ -1
PKP4-206ENST00000452162 S100A6P06703 90 aa8.79□□□□□ -1
PKP4-206ENST00000452162 H2AFB1P0C5Y9 115 aa8.79□□□□□ -1
PKP4-206ENST00000452162 OR9G9P0C7N8 305 aa8.79□□□□□ -1
PKP4-206ENST00000452162 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.79□□□□□ -1
PKP4-206ENST00000452162 DTD1Q8TEA8 209 aa8.79□□□□□ -1
PKP4-206ENST00000452162 LEAP2Q969E1 77 aa8.79□□□□□ -1
PKP4-206ENST00000452162 ZDHHC16Q969W1 377 aa8.79□□□□□ -1
PKP4-206ENST00000452162 WDR61Q9GZS3 305 aaKnown RBP8.79□□□□□ -1
PKP4-206ENST00000452162 IDI2-AS1Q9NZ38 188 aa8.79□□□□□ -1
PKP4-206ENST00000452162 HIVEP1P15822 2718 aa8.78□□□□□ -1
PKP4-206ENST00000452162 PAX1P15863 534 aa8.78□□□□□ -1
PKP4-206ENST00000452162 ATF4P18848 351 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms