RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 IGKV1D-13A0A0B4J2D9 117 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGKV1-6A0A0C4DH72 117 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 LOC105371267A0A1B0GV96 52 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 FAM24AA6NFZ4 105 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 IQCF6A8MYZ5 107 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 F8W036 122 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 H0Y980 276 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 RNASEK-C17orf49H0YIS7 233 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 H0YL77 283 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 WRBO00258 174 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 MED6O75586 246 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 PGLYRP1O75594 196 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 ATG12O94817 140 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 NXPH2O95156 264 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR2H2O95918 312 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 AMBPP02760 352 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 WNT2P09544 360 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 SEC11BP0C7V7 166 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 PGA5P0DJD9 388 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGKV1-13P0DP09 117 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 RCC1P18754 421 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 COX5AP20674 150 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 KITLGP21583 273 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 VDAC1P21796 283 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 UCP1P25874 307 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 MPV17P39210 176 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 RAB5CP51148 216 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 NOVA1P51513 510 aaKnown RBP2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 KRTAP10-5P60370 271 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 ERVS71-1P61550 626 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 PSG7Q13046 419 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 HERPUD1Q15011 391 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 ZNF146Q15072 292 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 P2RY6Q15077 328 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 GUSBP1Q15486 140 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGFBP7Q16270 282 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 ALKBH6Q3KRA9 238 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 ACSF3Q4G176 576 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 CD164L2Q6UWJ8 174 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGFL3Q6UXB1 125 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 Q6ZRG5 221 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 BHLHA15Q7RTS1 189 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 WDR86Q86TI4 376 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 MYPOPQ86VE0 399 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 C11orf53Q8IXP5 236 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 C1orf174Q8IYL3 243 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 SPAG16Q8N0X2 631 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 SVBPQ8N300 66 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 C17orf78Q8N4C9 275 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 WDR31Q8NA23 367 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 OR5D13Q8NGL4 314 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 PLPPR1Q8TBJ4 325 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 KLF14Q8TD94 323 aaPredicted RBP2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 TAAR6Q96RI8 345 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 TSNAXQ99598 290 aaKnown RBP2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 TXN2Q99757 166 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 NRIP2Q9BQI9 281 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 GINS3Q9BRX5 216 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 CABLES2Q9BTV7 478 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 ADAT1Q9BUB4 502 aaKnown RBP2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 BCL2L14Q9BZR8 327 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 SLC25A31Q9H0C2 315 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 ARV1Q9H2C2 271 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 CXXC4Q9H2H0 198 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 C11orf1Q9H5F2 150 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 PLEKHF2Q9H8W4 249 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 WFDC1Q9HC57 220 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 TREM1Q9NP99 234 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 PARP11Q9NR21 331 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 KCNIP1Q9NZI2 227 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 PURGQ9UJV8 347 aaKnown RBP2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 TRAPPC2LQ9UL33 140 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 WIPI2Q9Y4P8 454 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 SEC16AO15027 2179 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 TECTAO75443 2155 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 PI4KAP42356 2102 aa2.8□□□□□ -1.96
HMGB3P11-201ENST00000440127 KMT2EQ8IZD2 1858 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 CABIN1Q9Y6J0 2220 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 SDK2Q58EX2 2172 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 ALPK2Q86TB3 2170 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 TRAV39A0A0B4J263 110 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 A0A0U1RRA0 63 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 A0A1B0GU03 582 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 A0A1B0GWJ7 208 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 A0A1W2PN81 502 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 A0A1W2PPI3 338 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 TMEM30CPA0ZSE6 113 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 RNF212BA8MTL3 300 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 DNASE2O00115 360 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 ABCD4O14678 606 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 TNFSF12O43508 249 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 CHST1O43916 411 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 TIMM8AO60220 97 aaPredicted RBP2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 SNAPINO95295 136 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 HAND1O96004 215 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 IGKV3-15P01624 115 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 SERPINE2P07093 398 aa2.79□□□□□ -1.96
HMGB3P11-201ENST00000440127 SLC25A6P12236 298 aa2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms