RNA–Protein interactions for RNA: ENST00000439806.6

CPNE1-218, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-218ENST00000439806 ACOT6Q3I5F7 207 aaPredicted RBP8.6□□□□□ -1.03
CPNE1-218ENST00000439806 RNF212Q495C1 297 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 AARDQ4LEZ3 155 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 TCF23Q7RTU1 214 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 ZFP82Q8N141 532 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 ZNF439Q8NDP4 499 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 OR10G9Q8NGN4 311 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 OR10G7Q8NGN6 311 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 DDB2Q92466 427 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 P2RX4Q99571 388 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 NIPSNAP3BQ9BS92 247 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 NPCDR1Q9BY65 106 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 SLC25A22Q9H936 323 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 SAP30LQ9HAJ7 183 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 DCAF16Q9NXF7 216 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 SLC25A10Q9UBX3 287 aaPredicted RBP8.6□□□□□ -1.03
CPNE1-218ENST00000439806 VAX2Q9UIW0 290 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 TCF19Q9Y242 345 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 PPIAL4AQ9Y536 164 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 LINC00312Q9Y6C7 94 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 EP300Q09472 2414 aaPredicted RBP8.6□□□□□ -1.03
CPNE1-218ENST00000439806 USF3Q68DE3 2245 aa8.6□□□□□ -1.03
CPNE1-218ENST00000439806 TRGV8A0A0C4DH27 118 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 TMPRSS2O15393 492 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 CYB5BO43169 146 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 SOX15O60248 233 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 ARG1P05089 322 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 VDAC2P45880 294 aaPredicted RBP8.59□□□□□ -1.03
CPNE1-218ENST00000439806 TMPRSS3P57727 454 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 DLK1P80370 383 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 MEF2CQ06413 473 aaPredicted RBP8.59□□□□□ -1.03
CPNE1-218ENST00000439806 RTL8BQ17RB0 113 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 SLC35E3Q7Z769 313 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 TGIF2LYQ8IUE0 185 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 VKORC1L1Q8N0U8 176 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 OR10A7Q8NGE5 316 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 ISOC2Q96AB3 205 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 SLC35D1Q9NTN3 355 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 RPUSD1Q9UJJ7 312 aaKnown RBP8.59□□□□□ -1.03
CPNE1-218ENST00000439806 WDR83OSQ9Y284 106 aa8.59□□□□□ -1.03
CPNE1-218ENST00000439806 CNOT1A5YKK6 2376 aaKnown RBP8.58□□□□□ -1.04
CPNE1-218ENST00000439806 A0A087WWC5 75 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 TRAV3A0A0B4J244 114 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 C15orf61A6NNL5 157 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 TMEM178BH3BS89 294 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 NDUFB3O43676 98 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 IGKV1D-33P01593 117 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 IGKV1-33P01594 117 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 FAM87AP0C7U9 286 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 RAB5AP20339 215 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 CD1BP29016 333 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 CDC34P49427 236 aaPredicted RBP8.58□□□□□ -1.04
CPNE1-218ENST00000439806 PSMB3P49720 205 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 PNRC1Q12796 327 aaPredicted RBP8.58□□□□□ -1.04
CPNE1-218ENST00000439806 PDLIM3Q53GG5 364 aaPredicted RBP8.58□□□□□ -1.04
CPNE1-218ENST00000439806 NCMAPQ5T1S8 102 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 UTF1Q5T230 341 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 SLC25A48Q6ZT89 311 aaKnown RBP8.58□□□□□ -1.04
CPNE1-218ENST00000439806 FAM24BQ8N5W8 94 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 ZNF383Q8NA42 475 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 C2CD4CQ8TF44 421 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 H1FXQ92522 213 aaKnown RBP8.58□□□□□ -1.04
CPNE1-218ENST00000439806 WFIKKN1Q96NZ8 548 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 VKORC1Q9BQB6 163 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 ZNF251Q9BRH9 671 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 GGACTQ9BVM4 153 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 LINC00574Q9H8X3 128 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 MANBALQ9NQG1 85 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 TMEM106BQ9NUM4 274 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 FOXA2Q9Y261 457 aaPredicted RBP8.58□□□□□ -1.04
CPNE1-218ENST00000439806 MSRB2Q9Y3D2 182 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 CUL9Q8IWT3 2517 aa8.58□□□□□ -1.04
CPNE1-218ENST00000439806 VPS13AQ96RL7 3174 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 CADP27708 2225 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 B4DEV8 164 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 MPDU1O75352 247 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 MMP23AO75900 390 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 APOA2P02652 100 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 IFNA4P05014 189 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 CD3EP07766 207 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 AKR1D1P51857 326 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 UCNP55089 124 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 HSPE1P61604 102 aaKnown RBP8.57□□□□□ -1.04
CPNE1-218ENST00000439806 RPL31P62899 125 aaKnown RBP8.57□□□□□ -1.04
CPNE1-218ENST00000439806 PMS2P11Q13670 270 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 HABP2Q14520 560 aaPredicted RBP8.57□□□□□ -1.04
CPNE1-218ENST00000439806 LRRC10Q5BKY1 277 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 FAM90A2PQ658T7 463 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 OR4A47Q6IF82 309 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 C1orf229Q6ZS94 237 aaPredicted RBP8.57□□□□□ -1.04
CPNE1-218ENST00000439806 RPP25LQ8N5L8 163 aaKnown RBP8.57□□□□□ -1.04
CPNE1-218ENST00000439806 OR13D1Q8NGV5 346 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 CA5BP1Q8WTZ4 195 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 RNASE6Q93091 150 aaKnown RBP8.57□□□□□ -1.04
CPNE1-218ENST00000439806 RHOVQ96L33 236 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 ZNF714Q96N38 554 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 COL25A1Q9BXS0 654 aaPredicted RBP8.57□□□□□ -1.04
CPNE1-218ENST00000439806 SIRT7Q9NRC8 400 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 KCNIP2Q9NS61 270 aa8.57□□□□□ -1.04
CPNE1-218ENST00000439806 PRNDQ9UKY0 176 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms