RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 DMRT1Q9Y5R6 373 aa13.01□□□□□ -0.33
CPSF4-203ENST00000430038 A0A0G2JLM5 398 aa13□□□□□ -0.33
CPSF4-203ENST00000430038 ATP6V1G2O95670 118 aa13□□□□□ -0.33
CPSF4-203ENST00000430038 RRASP10301 218 aa13□□□□□ -0.33
CPSF4-203ENST00000430038 EDN2P20800 178 aa13□□□□□ -0.33
CPSF4-203ENST00000430038 PSMB9P28065 219 aa13□□□□□ -0.33
CPSF4-203ENST00000430038 MECP2P51608 486 aaKnown RBP13□□□□□ -0.33
CPSF4-203ENST00000430038 CASC10Q5T4H9 136 aa13□□□□□ -0.33
CPSF4-203ENST00000430038 ZNF645Q8N7E2 425 aa13□□□□□ -0.33
CPSF4-203ENST00000430038 TMEM68Q96MH6 324 aa13□□□□□ -0.33
CPSF4-203ENST00000430038 TM2D3Q9BRN9 247 aa13□□□□□ -0.33
CPSF4-203ENST00000430038 AKIP1Q9NQ31 210 aa13□□□□□ -0.33
CPSF4-203ENST00000430038 OR2W1Q9Y3N9 320 aa13□□□□□ -0.33
CPSF4-203ENST00000430038 TRBV9A0A0B4J1U6 114 aa12.99□□□□□ -0.33
CPSF4-203ENST00000430038 C3orf84H3BNL1 204 aa12.99□□□□□ -0.33
CPSF4-203ENST00000430038 BMPR1BO00238 502 aa12.99□□□□□ -0.33
CPSF4-203ENST00000430038 FCGR3BO75015 233 aa12.99□□□□□ -0.33
CPSF4-203ENST00000430038 OR9G9P0C7N8 305 aa12.99□□□□□ -0.33
CPSF4-203ENST00000430038 ZP3P21754 424 aa12.99□□□□□ -0.33
CPSF4-203ENST00000430038 SDC2P34741 201 aa12.99□□□□□ -0.33
CPSF4-203ENST00000430038 ANKRD13BQ86YJ7 626 aa12.99□□□□□ -0.33
CPSF4-203ENST00000430038 OSR1Q8TAX0 266 aaPredicted RBP12.99□□□□□ -0.33
CPSF4-203ENST00000430038 MUC7Q8TAX7 377 aa12.99□□□□□ -0.33
CPSF4-203ENST00000430038 LGALS14Q8TCE9 139 aa12.99□□□□□ -0.33
CPSF4-203ENST00000430038 ADTRPQ96IZ2 230 aa12.99□□□□□ -0.33
CPSF4-203ENST00000430038 PHB2Q99623 299 aa12.99□□□□□ -0.33
CPSF4-203ENST00000430038 ELOVL1Q9BW60 279 aa12.99□□□□□ -0.33
CPSF4-203ENST00000430038 RBMX2Q9Y388 322 aaKnown RBP12.99□□□□□ -0.33
CPSF4-203ENST00000430038 RRP15Q9Y3B9 282 aaKnown RBP12.99□□□□□ -0.33
CPSF4-203ENST00000430038 HMX3A6NHT5 357 aa12.98□□□□□ -0.33
CPSF4-203ENST00000430038 TEX22C9J3V5 150 aa12.98□□□□□ -0.33
CPSF4-203ENST00000430038 MRPS14O60783 128 aaKnown RBP12.98□□□□□ -0.33
CPSF4-203ENST00000430038 TUSC2O75896 110 aa12.98□□□□□ -0.33
CPSF4-203ENST00000430038 IL6RP08887 468 aaPredicted RBP12.98□□□□□ -0.33
CPSF4-203ENST00000430038 MYOD1P15172 320 aa12.98□□□□□ -0.33
CPSF4-203ENST00000430038 AADACP22760 399 aa12.98□□□□□ -0.33
CPSF4-203ENST00000430038 RANBP1P43487 201 aa12.98□□□□□ -0.33
CPSF4-203ENST00000430038 CDK10Q15131 360 aa12.98□□□□□ -0.33
CPSF4-203ENST00000430038 VMA21Q3ZAQ7 101 aa12.98□□□□□ -0.33
CPSF4-203ENST00000430038 SFXN4Q6P4A7 337 aa12.98□□□□□ -0.33
CPSF4-203ENST00000430038 GVQW1Q8N7I0 195 aa12.98□□□□□ -0.33
CPSF4-203ENST00000430038 ACOT12Q8WYK0 555 aa12.98□□□□□ -0.33
CPSF4-203ENST00000430038 SLC25A38Q96DW6 304 aa12.98□□□□□ -0.33
CPSF4-203ENST00000430038 RHOGP84095 191 aa12.97□□□□□ -0.33
CPSF4-203ENST00000430038 MXD1Q05195 221 aa12.97□□□□□ -0.33
CPSF4-203ENST00000430038 CBX3Q13185 183 aa12.97□□□□□ -0.33
CPSF4-203ENST00000430038 CNIH2Q6PI25 160 aa12.97□□□□□ -0.33
CPSF4-203ENST00000430038 ZNF773Q6PK81 442 aa12.97□□□□□ -0.33
CPSF4-203ENST00000430038 KCTD9Q7L273 389 aa12.97□□□□□ -0.33
CPSF4-203ENST00000430038 TTC9CQ8N5M4 171 aa12.97□□□□□ -0.33
CPSF4-203ENST00000430038 USMG5Q96IX5 58 aa12.97□□□□□ -0.33
CPSF4-203ENST00000430038 DCSTAMPQ9H295 470 aa12.97□□□□□ -0.33
CPSF4-203ENST00000430038 CGB1A6NKQ9 187 aa12.96□□□□□ -0.33
CPSF4-203ENST00000430038 A8MZ25 164 aa12.96□□□□□ -0.33
CPSF4-203ENST00000430038 FCER2P06734 321 aa12.96□□□□□ -0.33
CPSF4-203ENST00000430038 TPRA1Q86W33 373 aa12.96□□□□□ -0.33
CPSF4-203ENST00000430038 PUSL1Q8N0Z8 303 aaKnown RBP12.96□□□□□ -0.33
CPSF4-203ENST00000430038 DCUN1D5Q9BTE7 237 aa12.96□□□□□ -0.33
CPSF4-203ENST00000430038 RHBDL2Q9NX52 303 aa12.96□□□□□ -0.33
CPSF4-203ENST00000430038 ANXA10Q9UJ72 324 aa12.96□□□□□ -0.33
CPSF4-203ENST00000430038 SPATA2Q9UM82 520 aa12.96□□□□□ -0.33
CPSF4-203ENST00000430038 HYDINQ4G0P3 5121 aa12.95□□□□□ -0.34
CPSF4-203ENST00000430038 DNAH1Q9P2D7 4330 aa12.95□□□□□ -0.34
CPSF4-203ENST00000430038 PPP5D1E7EU14 171 aa12.95□□□□□ -0.34
CPSF4-203ENST00000430038 HLA-AP01891 365 aaKnown RBP12.95□□□□□ -0.34
CPSF4-203ENST00000430038 TGFBR1P36897 503 aa12.95□□□□□ -0.34
CPSF4-203ENST00000430038 EXOSC2Q13868 293 aaKnown RBP12.95□□□□□ -0.34
CPSF4-203ENST00000430038 RPEL1Q2QD12 228 aa12.95□□□□□ -0.34
CPSF4-203ENST00000430038 MFSD4AQ8N468 514 aa12.95□□□□□ -0.34
CPSF4-203ENST00000430038 CENPOQ9BU64 300 aa12.95□□□□□ -0.34
CPSF4-203ENST00000430038 EDA2RQ9HAV5 297 aa12.95□□□□□ -0.34
CPSF4-203ENST00000430038 CCL28Q9NRJ3 127 aa12.95□□□□□ -0.34
CPSF4-203ENST00000430038 SSR3Q9UNL2 185 aa12.95□□□□□ -0.34
CPSF4-203ENST00000430038 SELENOKQ9Y6D0 94 aa12.95□□□□□ -0.34
CPSF4-203ENST00000430038 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.94□□□□□ -0.34
CPSF4-203ENST00000430038 MPPED1O15442 326 aa12.94□□□□□ -0.34
CPSF4-203ENST00000430038 OR2J3O76001 311 aa12.94□□□□□ -0.34
CPSF4-203ENST00000430038 CTXN2P0C2S0 81 aa12.94□□□□□ -0.34
CPSF4-203ENST00000430038 GNG2P59768 71 aa12.94□□□□□ -0.34
CPSF4-203ENST00000430038 ARL6IP1Q15041 203 aa12.94□□□□□ -0.34
CPSF4-203ENST00000430038 HAGHQ16775 308 aa12.94□□□□□ -0.34
CPSF4-203ENST00000430038 MMD2Q8IY49 270 aa12.94□□□□□ -0.34
CPSF4-203ENST00000430038 SNAPC3Q92966 411 aa12.94□□□□□ -0.34
CPSF4-203ENST00000430038 FANCD2OSQ96PS1 177 aa12.94□□□□□ -0.34
CPSF4-203ENST00000430038 CITED4Q96RK1 184 aa12.94□□□□□ -0.34
CPSF4-203ENST00000430038 TAS2R8Q9NYW2 309 aa12.94□□□□□ -0.34
CPSF4-203ENST00000430038 SIGLEC8Q9NYZ4 499 aa12.94□□□□□ -0.34
CPSF4-203ENST00000430038 S4R3C0 116 aa12.94□□□□□ -0.34
CPSF4-203ENST00000430038 TRAV18A0A075B6X5 111 aa12.93□□□□□ -0.34
CPSF4-203ENST00000430038 ZNF785A8K8V0 405 aa12.93□□□□□ -0.34
CPSF4-203ENST00000430038 TNFSF12O43508 249 aa12.93□□□□□ -0.34
CPSF4-203ENST00000430038 NDUFB8O95169 186 aa12.93□□□□□ -0.34
CPSF4-203ENST00000430038 IGHV3-23P01764 117 aa12.93□□□□□ -0.34
CPSF4-203ENST00000430038 AREGP15514 252 aa12.93□□□□□ -0.34
CPSF4-203ENST00000430038 ATP5G2Q06055 141 aa12.93□□□□□ -0.34
CPSF4-203ENST00000430038 TMEM167AQ8TBQ9 72 aa12.93□□□□□ -0.34
CPSF4-203ENST00000430038 TCTEX1D2Q8WW35 142 aa12.93□□□□□ -0.34
CPSF4-203ENST00000430038 FCGR1BQ92637 280 aa12.93□□□□□ -0.34
CPSF4-203ENST00000430038 YTHDF1Q9BYJ9 559 aaKnown RBP12.93□□□□□ -0.34
CPSF4-203ENST00000430038 ZMAT4Q9H898 229 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms