RNA–Protein interactions for RNA: ENST00000427516.2

VTI1BP4-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 4, humanhuman

BASIC

Gene VTI1BP4, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP4-201ENST00000427516 BORCS8Q96FH0 119 aa4.75□□□□□ -1.65
VTI1BP4-201ENST00000427516 OR4C12Q96R67 309 aa4.75□□□□□ -1.65
VTI1BP4-201ENST00000427516 GGTLC1Q9BX51 225 aa4.75□□□□□ -1.65
VTI1BP4-201ENST00000427516 NPCDR1Q9BY65 106 aa4.75□□□□□ -1.65
VTI1BP4-201ENST00000427516 GTSF1LQ9H1H1 148 aa4.75□□□□□ -1.65
VTI1BP4-201ENST00000427516 R3HDMLQ9H3Y0 253 aa4.75□□□□□ -1.65
VTI1BP4-201ENST00000427516 C6orf106Q9H6K1 298 aaPredicted RBP4.75□□□□□ -1.65
VTI1BP4-201ENST00000427516 NPVFQ9HCQ7 196 aa4.75□□□□□ -1.65
VTI1BP4-201ENST00000427516 ALKBH4Q9NXW9 302 aa4.75□□□□□ -1.65
VTI1BP4-201ENST00000427516 THAP10Q9P2Z0 257 aaPredicted RBP4.75□□□□□ -1.65
VTI1BP4-201ENST00000427516 KMT2EQ8IZD2 1858 aa4.75□□□□□ -1.65
VTI1BP4-201ENST00000427516 PLXND1Q9Y4D7 1925 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 LOC102724200A0A096LPH7 203 aaPredicted RBP4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 TRAV8-6A0A0B4J262 113 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 A1L4Q6 167 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 C4orf51C9J302 202 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 NPIPB11E5RHQ5 1161 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 TUSC2O75896 110 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 NEURL1O76050 574 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 UTS2O95399 124 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 CLDN1O95832 211 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 EML2O95834 649 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 JMJD7P0C870 316 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 PAX9P55771 341 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 TAS2R45P59539 299 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 GNB1P62873 340 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 TLE1Q04724 770 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 PLCXD2Q0VAA5 305 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 CATR1Q13166 79 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 MYBPHQ13203 477 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 KLRD1Q13241 179 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 CEACAM21Q3KPI0 293 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 PDLIM3Q53GG5 364 aaPredicted RBP4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 CLLU1OSQ5K130 101 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 SPANXN5Q5MJ07 72 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 TSPO2Q5TGU0 170 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 CDCP2Q5VXM1 449 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 DGAT2L6Q6ZPD8 337 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 TCF23Q7RTU1 214 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 CA13Q8N1Q1 262 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 ZNF808Q8N4W9 903 aaPredicted RBP4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 OR9G1Q8NH87 305 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 GALMQ96C23 342 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 ANAPC13Q9BS18 74 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 RTN4RQ9BZR6 473 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 MED29Q9NX70 200 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 SLC25A10Q9UBX3 287 aaPredicted RBP4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 ERG28Q9UKR5 140 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 PPIAL4AQ9Y536 164 aa4.74□□□□□ -1.65
VTI1BP4-201ENST00000427516 A0A0J9YY10 115 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 A0A1B0GW15 77 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 A0A1B0GX78 115 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 SMIM27A0A1W2PRY6 76 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 TMEM8BA6NDV4 472 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 C2orf70A6NJV1 201 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 SHISA7A6NL88 538 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 FAM90A9PA6NNJ1 464 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 ZNF716A6NP11 495 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 G3V3Y1 287 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 H3BUT2 72 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 BMPR1BO00238 502 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 LMX1BO60663 402 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 WISP1O95388 367 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 TMEM50AO95807 157 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 IGKV1D-16P01601 117 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 IGLV3-1P01715 115 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 LTBRP36941 435 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 P2RY2P41231 377 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 RBM11P57052 281 aaKnown RBP4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 FAM53BQ14153 422 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 IBA57Q5T440 356 aaKnown RBP4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 TMEM215Q68D42 235 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 ZNF788Q6ZQV5 615 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 FAM231DQ6ZW35 169 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 ZAR1Q86SH2 424 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 DOLPP1Q86YN1 238 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 UBALD2Q8IYN6 164 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 GAPTQ8N292 157 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 NHLRC2Q8NBF2 726 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 OR4C3Q8NH37 302 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 OR10D3Q8NH80 312 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 OR4A5Q8NH83 315 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 OR1L1Q8NH94 360 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 ZNF721Q8TF20 911 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 H1FXQ92522 213 aaKnown RBP4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 SARAFQ96BY9 339 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 HARBI1Q96MB7 349 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 VGLL1Q99990 258 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 PHF7Q9BWX1 381 aaPredicted RBP4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 RBM24Q9BX46 236 aaKnown RBP4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 KRTAP9-2Q9BYQ4 174 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 FNDC4Q9H6D8 234 aaPredicted RBP4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 VSIRQ9H7M9 311 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 UBE2ZQ9H832 354 aaPredicted RBP4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 HES4Q9HCC6 221 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 PRTFDC1Q9NRG1 225 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 TNFRSF19Q9NS68 423 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 CTNNBIP1Q9NSA3 81 aaPredicted RBP4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 CACNG5Q9UF02 275 aa4.73□□□□□ -1.65
VTI1BP4-201ENST00000427516 PIGLQ9Y2B2 252 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms