RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 TVP23CQ96ET8 276 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 CLCC1Q96S66 551 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 PFDN5Q99471 154 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 P2RX4Q99571 388 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 SPAG8Q99932 426 aaPredicted RBP4.11□□□□□ -1.75
LINC00458-202ENST00000427299 HDHD3Q9BSH5 251 aaPredicted RBP4.11□□□□□ -1.75
LINC00458-202ENST00000427299 PSMG3Q9BT73 122 aaPredicted RBP4.11□□□□□ -1.75
LINC00458-202ENST00000427299 CABLES2Q9BTV7 478 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 PARD6GQ9BYG4 376 aaPredicted RBP4.11□□□□□ -1.75
LINC00458-202ENST00000427299 LINC00470Q9BZP3 86 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 OR2H1Q9GZK4 316 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 ZNF319Q9P2F9 582 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 MRPS18CQ9Y3D5 142 aaKnown RBP4.11□□□□□ -1.75
LINC00458-202ENST00000427299 FBXO7Q9Y3I1 522 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 WSB1Q9Y6I7 421 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 SHANK1Q9Y566 2161 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 ARID1AO14497 2285 aa4.11□□□□□ -1.75
LINC00458-202ENST00000427299 COL27A1Q8IZC6 1860 aaPredicted RBP4.11□□□□□ -1.75
LINC00458-202ENST00000427299 DOCK10Q96BY6 2186 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 TRBV6-6A0A0A6YYG2 114 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 TRAV1-1A0A0B4J248 108 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 RBFOX3A6NFN3 312 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 SEC14L6B5MCN3 397 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 TSTD3H0UI37 97 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 TRAPPC2LH3BP13 241 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 PPP1R2P9O14990 202 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 ANGPTL7O43827 346 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 EFNA2O43921 213 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 RAMP1O60894 148 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 SCGB2A1O75556 95 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 CYB5R3P00387 301 aaPredicted RBP4.1□□□□□ -1.75
LINC00458-202ENST00000427299 IFNA10P01566 189 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 SERPINE2P07093 398 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 OR8U8P0C7N1 319 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 CCL3P10147 92 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 BCL2P10415 239 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 B4GALT1P15291 398 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 AADACP22760 399 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 GNRHRP30968 328 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 APLNRP35414 380 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 PPP1CCP36873 323 aaKnown RBP4.1□□□□□ -1.75
LINC00458-202ENST00000427299 MLF1P58340 268 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 SERF2P84101 59 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 KIAA0141Q14154 515 aaPredicted RBP4.1□□□□□ -1.75
LINC00458-202ENST00000427299 PIGYQ3MUY2 71 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 NMSQ5H8A3 153 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 DCAF10Q5QP82 559 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 ZC2HC1BQ5TFG8 222 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 ZNF774Q6NX45 483 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 GUSBP11Q6P575 273 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 HEPN1Q6WQI6 88 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 LYZL2Q7Z4W2 148 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 STHQ8IWL8 128 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 TDHQ8IZJ6 230 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 DEFB119Q8N690 84 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 OR52M1Q8NGK5 317 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 OR5C1Q8NGR4 320 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 OR4A16Q8NH70 328 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 OR2AE1Q8NHA4 323 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 SCGB1C1Q8TD33 95 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 NEK7Q8TDX7 302 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 LSM10Q969L4 123 aaKnown RBP4.1□□□□□ -1.75
LINC00458-202ENST00000427299 APOBEC3DQ96AK3 386 aaPredicted RBP4.1□□□□□ -1.75
LINC00458-202ENST00000427299 SGK3Q96BR1 496 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 JSRP1Q96MG2 331 aaPredicted RBP4.1□□□□□ -1.75
LINC00458-202ENST00000427299 FAAP24Q9BTP7 215 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 TOLLIPQ9H0E2 274 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 SIRPDQ9H106 197 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 CRLF2Q9HC73 371 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 SH2D2AQ9NP31 389 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 NIT2Q9NQR4 276 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 TMEM242Q9NWH2 141 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 TREM2Q9NZC2 230 aa4.1□□□□□ -1.75
LINC00458-202ENST00000427299 DNAH14Q0VDD8 3507 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 TANC2Q9HCD6 1990 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 IGKV1D-8A0A087WSZ0 117 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 IGHV3-15A0A0B4J1V0 119 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 IGLV9-49A0A0B4J1Y8 123 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 IGSF23A1L1A6 192 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 ZNF716A6NP11 495 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 ANKRD30BLA7E2S9 258 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 H3BQ15 152 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 CYTIPO60759 359 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 CLN5O75503 358 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 SYNGR4O95473 234 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 NAPSAO96009 420 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 MBP02144 154 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 OR13C7P0DN81 318 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 AZU1P20160 251 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 ITGA3P26006 1051 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 GDF1P27539 372 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 OPRM1P35372 400 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 ARR3P36575 388 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 RPS10P46783 165 aaKnown RBP4.09□□□□□ -1.75
LINC00458-202ENST00000427299 NOVA1P51513 510 aaKnown RBP4.09□□□□□ -1.75
LINC00458-202ENST00000427299 DYNLT3P51808 116 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 LBX1P52954 281 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 CARD18P57730 90 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 CCL7P80098 99 aa4.09□□□□□ -1.75
LINC00458-202ENST00000427299 ZNF92Q03936 586 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms