RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 ZFC3H1O60293 1989 aaKnown RBP15.33■□□□□ 0.04
ARHGEF28-203ENST00000426542 RBFOX2O43251 390 aaKnown RBP eCLIP15.33■□□□□ 0.043e-8■■■■■ 40.2
ARHGEF28-203ENST00000426542 GFRA3O60609 400 aa15.33■□□□□ 0.04
ARHGEF28-203ENST00000426542 SMIM10L1P0DMW3 83 aa15.33■□□□□ 0.04
ARHGEF28-203ENST00000426542 RPS11P62280 158 aaKnown RBP eCLIP15.33■□□□□ 0.04
ARHGEF28-203ENST00000426542 MBNL2Q5VZF2 373 aaKnown RBP15.33■□□□□ 0.04
ARHGEF28-203ENST00000426542 SMIM10Q96HG1 83 aa15.33■□□□□ 0.04
ARHGEF28-203ENST00000426542 SMAD7O15105 426 aaKnown RBP15.33■□□□□ 0.04
ARHGEF28-203ENST00000426542 GAGE10A6NGK3 116 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 PRSS2P07478 247 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 ZNF146Q15072 292 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 PUSL1Q8N0Z8 303 aaKnown RBP15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 KIF13BQ9NQT8 1826 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 IGHV3-35A0A0C4DH35 117 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 PPP1R17O96001 155 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 IGHV3-23P01764 117 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 TSPOP30536 169 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 TMEM187Q14656 261 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 CHRNA10Q9GZZ6 450 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 BRWD1Q9NSI6 2320 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 LY75O60449 1722 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 C7orf71A4D174 169 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 C17orf51A8MQB3 221 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 DNM1P46Q6ZS02 220 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 LHFPL5Q8TAF8 219 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 MARF1Q9Y4F3 1742 aaKnown RBP15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 CFDP00746 253 aaPredicted RBP15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 MEIG1Q5JSS6 88 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 PARLQ9H300 379 aa15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 F11RQ9Y624 299 aaKnown RBP15.32■□□□□ 0.04
ARHGEF28-203ENST00000426542 AGAP20933 346 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 SRIP30626 198 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 DNASE2BQ8WZ79 361 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 OR5P3Q8WZ94 311 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 NPIPB3Q92617 1050 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 TDRD15B5MCY1 1934 aaKnown RBP15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 MOSP00540 346 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 PF4P02776 101 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 RND3P61587 244 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 ZNF385CQ66K41 422 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 GOLT1AQ6ZVE7 132 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 RECKO95980 971 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 PMCHL1Q16048 86 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 TIAF1O95411 115 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 ACSF3Q4G176 576 aaPredicted RBP15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 DRAM1Q8N682 238 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 SMIM8Q96KF7 97 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 TIMP4Q99727 224 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 NABP2Q9BQ15 211 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 SNRPD3P62318 126 aaKnown RBP15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 OR10S1Q8NGN2 331 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 ELOVL5Q9NYP7 299 aa15.31■□□□□ 0.04
ARHGEF28-203ENST00000426542 NAT1P18440 290 aa15.3■□□□□ 0.04
ARHGEF28-203ENST00000426542 C21orf62-AS1Q17RA5 79 aa15.3■□□□□ 0.04
ARHGEF28-203ENST00000426542 KIAA1644Q3SXP7 199 aa15.3■□□□□ 0.04
ARHGEF28-203ENST00000426542 FOXI3A8MTJ6 420 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF28-203ENST00000426542 CIRBPQ14011 172 aaKnown RBP15.3■□□□□ 0.04
ARHGEF28-203ENST00000426542 RPL39P5Q59GN2 51 aa15.3■□□□□ 0.04
ARHGEF28-203ENST00000426542 B9A039 149 aa15.3■□□□□ 0.04
ARHGEF28-203ENST00000426542 IL4P05112 153 aa15.3■□□□□ 0.04
ARHGEF28-203ENST00000426542 IFI6P09912 130 aa15.3■□□□□ 0.04
ARHGEF28-203ENST00000426542 HIST1H1AQ02539 215 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF28-203ENST00000426542 ZNRF1Q8ND25 227 aa15.3■□□□□ 0.04
ARHGEF28-203ENST00000426542 MRPL32Q9BYC8 188 aaKnown RBP15.3■□□□□ 0.04
ARHGEF28-203ENST00000426542 AKIRIN1Q9H9L7 192 aaPredicted RBP15.3■□□□□ 0.04
ARHGEF28-203ENST00000426542 NPFFO15130 113 aa15.3■□□□□ 0.04
ARHGEF28-203ENST00000426542 ASPHD2Q6ICH7 369 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 TMEM262E9PQX1 116 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 TRGC1P0CF51 173 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 UNQ9370/PRO34162Q6UXP9 181 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 LINC00305Q7Z4B0 112 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 KLRB1Q12918 225 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 GCSAMLQ5JQS6 135 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 TCF24Q7RTU0 167 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 NPDC1Q9NQX5 325 aaPredicted RBP15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 SPAG17Q6Q759 2223 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 IGHV3-66A0A0C4DH42 116 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 KLF4O43474 513 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 FOXH1O75593 365 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 CD200R1LQ6Q8B3 271 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 FDCSPQ8NFU4 85 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 IGHV3OR16-13A0A075B7E8 117 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 IGHV3-74A0A0B4J1X5 117 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 FOLR2P14207 255 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 FBLIM1Q8WUP2 373 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 CTHRC1Q96CG8 243 aa15.29■□□□□ 0.04
ARHGEF28-203ENST00000426542 H2BFSP57053 126 aa15.28■□□□□ 0.04
ARHGEF28-203ENST00000426542 TMEM30BQ3MIR4 351 aa15.28■□□□□ 0.04
ARHGEF28-203ENST00000426542 OR4D5Q8NGN0 318 aa15.28■□□□□ 0.04
ARHGEF28-203ENST00000426542 OR10AG1Q8NH19 301 aa15.28■□□□□ 0.04
ARHGEF28-203ENST00000426542 FAM159AQ6UWV7 190 aa15.28■□□□□ 0.04
ARHGEF28-203ENST00000426542 RSPO4Q2I0M5 234 aaPredicted RBP15.28■□□□□ 0.04
ARHGEF28-203ENST00000426542 GEMIN7Q9H840 131 aaKnown RBP15.28■□□□□ 0.04
ARHGEF28-203ENST00000426542 SFRP2Q96HF1 295 aa15.28■□□□□ 0.04
ARHGEF28-203ENST00000426542 PLP1P60201 277 aa15.28■□□□□ 0.04
ARHGEF28-203ENST00000426542 SPSB2Q99619 263 aa15.28■□□□□ 0.04
ARHGEF28-203ENST00000426542 C19orf24Q9BVV8 132 aa15.28■□□□□ 0.04
ARHGEF28-203ENST00000426542 ARFGEF1Q9Y6D6 1849 aa15.27■□□□□ 0.04
ARHGEF28-203ENST00000426542 A0A0B4J293 547 aa15.27■□□□□ 0.04
ARHGEF28-203ENST00000426542 TRGV3P03979 118 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms