RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 CCDC88CQ9P219 2028 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 A1L4Q6 167 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 ADMP35318 185 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 FAM74A4Q5TZK3 123 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 NABP2Q9BQ15 211 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 PMCHL2Q9BQD1 86 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 UBE2L6O14933 153 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 EGR4Q05215 589 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 FHL5Q5TD97 284 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 CRISPLD2Q9H0B8 497 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 C8orf88P0DMB2 117 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 MPV17P39210 176 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 DRAM1Q8N682 238 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 OR10J6PQ8NGY7 276 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 RCC1LQ96I51 464 aaKnown RBP10.29□□□□□ -0.76
UBR4-205ENST00000417040 SCNM1Q9BWG6 230 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 MPDU1O75352 247 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 CA11O75493 328 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 LINC00305Q7Z4B0 112 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 NR2C2APQ86WQ0 139 aa10.29□□□□□ -0.76
UBR4-205ENST00000417040 IGKV1D-43A0A0B4J1Z2 117 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 B4E171 279 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 HOXA5P20719 270 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 LCN2P80188 198 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 PMS2CLQ68D20 193 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 DYNLRB2Q8TF09 96 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 SMIM8Q96KF7 97 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 FNDC4Q9H6D8 234 aaPredicted RBP10.28□□□□□ -0.76
UBR4-205ENST00000417040 TMEM14DPA8MWL7 114 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 WNT9BO14905 357 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 IL6RP08887 468 aaPredicted RBP10.28□□□□□ -0.76
UBR4-205ENST00000417040 RELQ04864 619 aaPredicted RBP10.28□□□□□ -0.76
UBR4-205ENST00000417040 SFTA2Q6UW10 78 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 NPCDR1Q9BY65 106 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 IGHV3OR16-13A0A075B7E8 117 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 IGHV3-74A0A0B4J1X5 117 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 ZNF501Q96CX3 271 aaPredicted RBP10.28□□□□□ -0.76
UBR4-205ENST00000417040 MRPL16Q9NX20 251 aaKnown RBP10.28□□□□□ -0.76
UBR4-205ENST00000417040 IL4P05112 153 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 ID1P41134 155 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 PEF1Q9UBV8 284 aaKnown RBP10.28□□□□□ -0.76
UBR4-205ENST00000417040 IGKV3-20P01619 116 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 COX6CP09669 75 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 CLDND2Q8NHS1 167 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 TMEM70Q9BUB7 260 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 WDR54Q9H977 334 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 PHLDA3Q9Y5J5 127 aa10.28□□□□□ -0.76
UBR4-205ENST00000417040 CA1P00915 261 aaPredicted RBP10.27□□□□□ -0.76
UBR4-205ENST00000417040 APOHP02749 345 aaPredicted RBP10.27□□□□□ -0.76
UBR4-205ENST00000417040 GATAD1Q8WUU5 269 aa10.27□□□□□ -0.76
UBR4-205ENST00000417040 IDI2-AS1Q9NZ38 188 aa10.27□□□□□ -0.76
UBR4-205ENST00000417040 NPIPB3Q92617 1050 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 LINC00470Q9BZP3 86 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 SELENOKQ9Y6D0 94 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 C19orf54Q5BKX5 351 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 METTL26Q96S19 204 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 IL36BQ9NZH7 164 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 MARF1Q9Y4F3 1742 aaKnown RBP10.27□□□□□ -0.77
UBR4-205ENST00000417040 MGST3O14880 152 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 NDUFA3O95167 84 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 ERGP11308 486 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 FGF5P12034 268 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 DCAF10Q5QP82 559 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 GFI1BQ5VTD9 330 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 GLRX5Q86SX6 157 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 SCN8AQ9UQD0 1980 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 USP54Q70EL1 1684 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 HBBP68871 147 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 AMMECR1LQ6DCA0 310 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 NIT1Q86X76 327 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 HEXA-AS1Q9H8Q6 139 aa10.27□□□□□ -0.77
UBR4-205ENST00000417040 SPAG17Q6Q759 2223 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 FOXI3A8MTJ6 420 aaPredicted RBP10.26□□□□□ -0.77
UBR4-205ENST00000417040 IGFBP2P18065 325 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 GATA2P23769 480 aaPredicted RBP10.26□□□□□ -0.77
UBR4-205ENST00000417040 GPR82Q96P67 336 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 SSBP4Q9BWG4 385 aaPredicted RBP10.26□□□□□ -0.77
UBR4-205ENST00000417040 TRPM6Q9BX84 2022 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 SCN2AQ99250 2005 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 CSRP3P50461 194 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 TNFSF10P50591 281 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 HIST1H1AQ02539 215 aaPredicted RBP10.26□□□□□ -0.77
UBR4-205ENST00000417040 APOBEC4Q8WW27 367 aaKnown RBP10.26□□□□□ -0.77
UBR4-205ENST00000417040 GALNT14Q96FL9 552 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 C1RLQ9NZP8 487 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 TRBV20OR9-2A0A075B6H5 130 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 PCSK4Q6UW60 755 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 DERL1Q9BUN8 251 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 TCF19Q9Y242 345 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 PAPPA2Q9BXP8 1791 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 SERF1AO75920 110 aa10.26□□□□□ -0.77
UBR4-205ENST00000417040 IGHV3-49A0A0A0MS15 119 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 UCP3P55916 312 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 HSPE1P61604 102 aaKnown RBP10.25□□□□□ -0.77
UBR4-205ENST00000417040 FOXC2Q99958 501 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 RNF126Q9BV68 326 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 RNASE7Q9H1E1 156 aaKnown RBP10.25□□□□□ -0.77
UBR4-205ENST00000417040 TRBV9A0A0B4J1U6 114 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 A0A1B0GWB2 263 aa10.25□□□□□ -0.77
UBR4-205ENST00000417040 ZNF414Q96IQ9 312 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms