RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 C1orf109Q9NX04 203 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DUX4Q9UBX2 424 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PCTPQ9UKL6 214 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RNF11Q9Y3C5 154 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 YTHDF2Q9Y5A9 579 aaKnown RBP1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TSSC4Q9Y5U2 329 aaPredicted RBP1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ALPK2Q86TB3 2170 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 HYDINQ4G0P3 5121 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 HEATR5BQ9P2D3 2071 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 HERC2O95714 4834 aa1.63□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CCDC88CQ9P219 2028 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DNAH3Q8TD57 4116 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 LOC100653049A0A140TA62 436 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 EXOC1LA0A1B0GW35 172 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PRORSD1PA6NEY8 169 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 FAM159BA6NKW6 160 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 VGLL3A8MV65 326 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ANKRD65E5RJM6 399 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 H7C2Y5 167 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZNF701M0R085 212 aaPredicted RBP1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 M0R1W7 72 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TNFRSF11BO00300 401 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MANBAO00462 879 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TCAPO15273 167 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SLC16A7O60669 478 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MPDU1O75352 247 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 KRT34O76011 436 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PDYNP01213 254 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 IGF2P01344 180 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 IGHV3-11P01762 117 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 HMGN2P05204 90 aaKnown RBP1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RPS17P08708 135 aaKnown RBP1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MUC1P15941 1255 aaPredicted RBP1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZNF823P16415 610 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TCP1P17987 556 aaKnown RBP1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PMCHP20382 165 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 NUP62P37198 522 aaPredicted RBP1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OPRK1P41145 380 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 KIR3DL2P43630 455 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PSMB2P49721 201 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 GDI2P50395 445 aaKnown RBP1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 UBE2E1P51965 193 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CLDN8P56748 225 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TAS2R46P59540 309 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TAS2R60P59551 318 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TNFAIP6P98066 277 aaPredicted RBP1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PITPNAQ00169 270 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CDK5Q00535 292 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DR1Q01658 176 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 EIF4EBP1Q13541 118 aaPredicted RBP1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR4D1Q15615 310 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PRSS8Q16651 343 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CEACAM16Q2WEN9 425 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DEFB112Q30KQ8 113 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZNF404Q494X3 552 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 LIN52Q52LA3 116 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 FAM27D1Q5T7N8 215 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ZNF691Q5VV52 312 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 C1orf140Q5VVS0 124 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 C8orf74Q6P047 294 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PLET1Q6UQ28 207 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 C3orf62Q6ZUJ4 267 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SLC36A1Q7Z2H8 476 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 NEGR1Q7Z3B1 354 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 KRTAP11-1Q8IUC1 163 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CTAGE3PQ8IX95 158 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 C20orf196Q8IYI0 205 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 Q8N2B8 174 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TMEM256Q8N2U0 113 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SLC22A24Q8N4F4 322 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 GATSQ8NAP1 163 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 FBXO36Q8NEA4 188 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ATP6V1C2Q8NEY4 427 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SLC26A10Q8NG04 563 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 OR4K5Q8NGD3 323 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CLHC1Q8NHS4 586 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 YIPF5Q969M3 257 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ISOC2Q96AB3 205 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RPEQ96AT9 228 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MRPL48Q96GC5 212 aaKnown RBP1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SLC25A44Q96H78 314 aaPredicted RBP1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PPP3R2Q96LZ3 170 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 SDF2Q99470 211 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CHID1Q9BWS9 393 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ULBP2Q9BZM5 246 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 ABCB9Q9NP78 766 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RPRD1BQ9NQG5 326 aaKnown RBP1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 PTTG3PQ9NZH4 202 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 KAAG1Q9UBP8 84 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 RCL1Q9Y2P8 373 aaKnown RBP1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 UTP11Q9Y3A2 253 aaKnown RBP1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 CR1P17927 2039 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MALRD1Q5VYJ5 2156 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 NINQ8N4C6 2090 aa1.62□□□□□ -2.15
RNU6-1140P-201ENST00000410517 EML6Q6ZMW3 1958 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 LYSTQ99698 3801 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DNAH9Q9NYC9 4486 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 DNAH7Q8WXX0 4024 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 MED12Q93074 2177 aa1.61□□□□□ -2.15
RNU6-1140P-201ENST00000410517 TRAV36DV7A0A075B6V5 113 aa1.61□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms