RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 FADS6Q8N9I5 356 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 TMEM54Q969K7 222 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 RNF2Q99496 336 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 SERTAD4Q9NUC0 356 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 TP73-AS1Q9UF72 201 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 LIFP15018 202 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 DUSP3P51452 185 aaPredicted RBP14.36□□□□□ -0.11
PTPRA-205ENST00000399903 ASPHD1Q5U4P2 390 aa14.36□□□□□ -0.11
PTPRA-205ENST00000399903 ZNF324BQ6AW86 544 aaPredicted RBP14.36□□□□□ -0.11
PTPRA-205ENST00000399903 ZFHX2Q9C0A1 2572 aaPredicted RBP14.36□□□□□ -0.11
PTPRA-205ENST00000399903 CA6P23280 308 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 NTF4P34130 210 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 LINC00205P59089 165 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 ZNF585BQ52M93 769 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 C1orf174Q8IYL3 243 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 CT55Q8WUE5 264 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 PLPPR2Q96GM1 343 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 RCHY1Q96PM5 261 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 FOXB1Q99853 325 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 WDR54Q9H977 334 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 FOXL1Q12952 345 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 DCAF12Q5T6F0 453 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 PPP1R32Q7Z5V6 425 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 OR5A2Q8NGI9 324 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 RNF138Q8WVD3 245 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 BET1LQ9NYM9 111 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 LOC102723996A0A087X1L8 192 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 ARL14EPLP0DKL9 152 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 UBE2V1Q13404 147 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 ZIC4Q8N9L1 334 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 BORCS7Q96B45 105 aa14.35□□□□□ -0.11
PTPRA-205ENST00000399903 QTRT1Q9BXR0 403 aaKnown RBP14.35□□□□□ -0.11
PTPRA-205ENST00000399903 C5orf49A4QMS7 147 aa14.34□□□□□ -0.11
PTPRA-205ENST00000399903 PINLYPA6NC86 204 aa14.34□□□□□ -0.11
PTPRA-205ENST00000399903 MLNRO43193 412 aa14.34□□□□□ -0.11
PTPRA-205ENST00000399903 IGLC2P0DOY2 106 aa14.34□□□□□ -0.11
PTPRA-205ENST00000399903 IGLC3P0DOY3 106 aa14.34□□□□□ -0.11
PTPRA-205ENST00000399903 COMPP49747 757 aaPredicted RBP14.34□□□□□ -0.11
PTPRA-205ENST00000399903 FGF12P61328 243 aa14.34□□□□□ -0.11
PTPRA-205ENST00000399903 Q56UQ5 140 aa14.34□□□□□ -0.11
PTPRA-205ENST00000399903 OR2H1Q9GZK4 316 aa14.34□□□□□ -0.11
PTPRA-205ENST00000399903 LIN7CQ9NUP9 197 aaKnown RBP14.34□□□□□ -0.11
PTPRA-205ENST00000399903 PDE6DO43924 150 aa14.34□□□□□ -0.11
PTPRA-205ENST00000399903 FAM58AQ8N1B3 248 aa14.34□□□□□ -0.11
PTPRA-205ENST00000399903 SSMEM1Q8WWF3 244 aa14.34□□□□□ -0.11
PTPRA-205ENST00000399903 TMEM38BQ9NVV0 291 aa14.34□□□□□ -0.11
PTPRA-205ENST00000399903 MGAQ8IWI9 3026 aa14.33□□□□□ -0.11
PTPRA-205ENST00000399903 DPRXA6NFQ7 191 aa14.33□□□□□ -0.11
PTPRA-205ENST00000399903 CXCL13O43927 109 aa14.33□□□□□ -0.11
PTPRA-205ENST00000399903 GPX1P07203 203 aa14.33□□□□□ -0.11
PTPRA-205ENST00000399903 TIMP3P35625 211 aa14.33□□□□□ -0.11
PTPRA-205ENST00000399903 RELBQ01201 579 aa14.33□□□□□ -0.11
PTPRA-205ENST00000399903 SLC25A53Q5H9E4 307 aa14.33□□□□□ -0.11
PTPRA-205ENST00000399903 LDLRAD2Q5SZI1 272 aa14.33□□□□□ -0.11
PTPRA-205ENST00000399903 IL36GQ9NZH8 169 aa14.33□□□□□ -0.11
PTPRA-205ENST00000399903 SLC45A2Q9UMX9 530 aa14.33□□□□□ -0.11
PTPRA-205ENST00000399903 SYNGR4O95473 234 aa14.33□□□□□ -0.12
PTPRA-205ENST00000399903 PDLIM3Q53GG5 364 aaPredicted RBP14.33□□□□□ -0.12
PTPRA-205ENST00000399903 FBLN7Q53RD9 439 aa14.33□□□□□ -0.12
PTPRA-205ENST00000399903 TMEM42Q69YG0 159 aa14.33□□□□□ -0.12
PTPRA-205ENST00000399903 LINC00696Q6ZRV3 163 aa14.33□□□□□ -0.12
PTPRA-205ENST00000399903 ZNF596Q8TC21 504 aa14.33□□□□□ -0.12
PTPRA-205ENST00000399903 FAM234AQ9H0X4 552 aa14.33□□□□□ -0.12
PTPRA-205ENST00000399903 TIMM8BQ9Y5J9 83 aaPredicted RBP14.33□□□□□ -0.12
PTPRA-205ENST00000399903 HEATR1Q9H583 2144 aaKnown RBP14.33□□□□□ -0.12
PTPRA-205ENST00000399903 A0A1W2PNU3 283 aaPredicted RBP14.33□□□□□ -0.12
PTPRA-205ENST00000399903 C17orf112F2Z3M2 114 aa14.33□□□□□ -0.12
PTPRA-205ENST00000399903 DEGS1O15121 323 aa14.33□□□□□ -0.12
PTPRA-205ENST00000399903 SRIP30626 198 aa14.33□□□□□ -0.12
PTPRA-205ENST00000399903 DHRS13Q6UX07 377 aa14.33□□□□□ -0.12
PTPRA-205ENST00000399903 LOXL4Q96JB6 756 aa14.33□□□□□ -0.12
PTPRA-205ENST00000399903 IGLV3-32A0A0A0MS00 114 aa14.32□□□□□ -0.12
PTPRA-205ENST00000399903 VASH2Q86V25 355 aa14.32□□□□□ -0.12
PTPRA-205ENST00000399903 MMD2Q8IY49 270 aa14.32□□□□□ -0.12
PTPRA-205ENST00000399903 LSM10Q969L4 123 aaKnown RBP14.32□□□□□ -0.12
PTPRA-205ENST00000399903 NCKAP5O14513 1909 aa14.32□□□□□ -0.12
PTPRA-205ENST00000399903 A8MXE2 369 aa14.32□□□□□ -0.12
PTPRA-205ENST00000399903 P04436 131 aa14.32□□□□□ -0.12
PTPRA-205ENST00000399903 C3orf79P0CE67 100 aa14.32□□□□□ -0.12
PTPRA-205ENST00000399903 LTC4SQ16873 150 aa14.32□□□□□ -0.12
PTPRA-205ENST00000399903 TMEM14EPQ6UXP3 125 aa14.32□□□□□ -0.12
PTPRA-205ENST00000399903 DRAM1Q8N682 238 aa14.32□□□□□ -0.12
PTPRA-205ENST00000399903 FGF23Q9GZV9 251 aaPredicted RBP14.32□□□□□ -0.12
PTPRA-205ENST00000399903 NXPH2O95156 264 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 CLDN14O95500 239 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 CELA3AP09093 270 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 RPL31P62899 125 aaKnown RBP14.31□□□□□ -0.12
PTPRA-205ENST00000399903 MRPL52Q86TS9 123 aaKnown RBP14.31□□□□□ -0.12
PTPRA-205ENST00000399903 GCM1Q9NP62 436 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 ODAMA1E959 279 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 GFRA1P56159 465 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 YPEL3P61236 119 aaPredicted RBP14.31□□□□□ -0.12
PTPRA-205ENST00000399903 DOLPP1Q86YN1 238 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 PRR14LQ5THK1 2151 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 S1PR2O95136 353 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 VAMP5O95183 116 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 GDF1P27539 372 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 DSCR4P56555 118 aaPredicted RBP14.31□□□□□ -0.12
PTPRA-205ENST00000399903 RPEL1Q2QD12 228 aa14.31□□□□□ -0.12
PTPRA-205ENST00000399903 SPATA46Q5T0L3 261 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms