RNA–Protein interactions for RNA: ENST00000399084.5

HLA-DQB1-204, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-204ENST00000399084 NCMAPQ5T1S8 102 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 MAP1LC3BQ9GZQ8 125 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 TMEM140Q9NV12 185 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 PRELID1Q9Y255 219 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 WDR83OSQ9Y284 106 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 CADP27708 2225 aa14.6□□□□□ -0.07
HLA-DQB1-204ENST00000399084 PRRC2CQ9Y520 2896 aaKnown RBP14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 SAA2-SAA4A0A096LPE2 208 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 FNDC10F2Z333 226 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 TMEM178BH3BS89 294 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 TSPAN9O75954 239 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 FSTL3O95633 263 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 CRYBA1P05813 215 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 SAA2P0DJI9 122 aaPredicted RBP14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 CD1BP29016 333 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RAB13P51153 203 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RAB5BP61020 215 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 HSPE1P61604 102 aaKnown RBP14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 DLK1P80370 383 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 EFNB3Q15768 340 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 ZNF726P1Q15940 193 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RTL8BQ17RB0 113 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 ACOT6Q3I5F7 207 aaPredicted RBP14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 FBXL19-AS1Q494R0 122 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 FAM71F2Q6NXP2 309 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 HEPN1Q6WQI6 88 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 DEFB108BQ8NET1 73 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 ZDHHC16Q969W1 377 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RHOVQ96L33 236 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 NPCDR1Q9BY65 106 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 HEYLQ9NQ87 328 aaPredicted RBP14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 BIN3Q9NQY0 253 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 FKBP11Q9NYL4 201 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 GNG13Q9P2W3 67 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 KAAG1Q9UBP8 84 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 SLC25A10Q9UBX3 287 aaPredicted RBP14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 ZNF257Q9Y2Q1 563 aa14.59□□□□□ -0.07
HLA-DQB1-204ENST00000399084 DCHS1Q96JQ0 3298 aa14.58□□□□□ -0.07
HLA-DQB1-204ENST00000399084 C15orf61A6NNL5 157 aa14.58□□□□□ -0.07
HLA-DQB1-204ENST00000399084 TCF23Q7RTU1 214 aa14.58□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RPP25LQ8N5L8 163 aaKnown RBP14.58□□□□□ -0.07
HLA-DQB1-204ENST00000399084 RNASE6Q93091 150 aaKnown RBP14.58□□□□□ -0.07
HLA-DQB1-204ENST00000399084 LHX4Q969G2 390 aa14.58□□□□□ -0.07
HLA-DQB1-204ENST00000399084 MALSU1Q96EH3 234 aa14.58□□□□□ -0.07
HLA-DQB1-204ENST00000399084 MANBALQ9NQG1 85 aa14.58□□□□□ -0.07
HLA-DQB1-204ENST00000399084 TMEM14BQ9NUH8 114 aa14.58□□□□□ -0.07
HLA-DQB1-204ENST00000399084 PRNDQ9UKY0 176 aa14.58□□□□□ -0.07
HLA-DQB1-204ENST00000399084 PUS1Q9Y606 427 aaKnown RBP eCLIP14.58□□□□□ -0.07
HLA-DQB1-204ENST00000399084 DSCAMO60469 2012 aa14.58□□□□□ -0.08
HLA-DQB1-204ENST00000399084 DSCAML1Q8TD84 2053 aa14.58□□□□□ -0.08
HLA-DQB1-204ENST00000399084 TNFRSF13BO14836 293 aaPredicted RBP14.58□□□□□ -0.08
HLA-DQB1-204ENST00000399084 TMPRSS2O15393 492 aa14.58□□□□□ -0.08
HLA-DQB1-204ENST00000399084 IFNA10P01566 189 aa14.58□□□□□ -0.08
HLA-DQB1-204ENST00000399084 LCN15Q6UWW0 184 aa14.58□□□□□ -0.08
HLA-DQB1-204ENST00000399084 LYG1Q8N1E2 194 aa14.58□□□□□ -0.08
HLA-DQB1-204ENST00000399084 FAM216BQ8N7L0 139 aa14.58□□□□□ -0.08
HLA-DQB1-204ENST00000399084 CYB561D1Q8N8Q1 229 aa14.58□□□□□ -0.08
HLA-DQB1-204ENST00000399084 OR10G9Q8NGN4 311 aa14.58□□□□□ -0.08
HLA-DQB1-204ENST00000399084 OR10G7Q8NGN6 311 aa14.58□□□□□ -0.08
HLA-DQB1-204ENST00000399084 HIST1H2BAQ96A08 127 aa14.58□□□□□ -0.08
HLA-DQB1-204ENST00000399084 WFIKKN1Q96NZ8 548 aa14.58□□□□□ -0.08
HLA-DQB1-204ENST00000399084 TMEM242Q9NWH2 141 aa14.58□□□□□ -0.08
HLA-DQB1-204ENST00000399084 DYSFO75923 2080 aa14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 CEP250Q9BV73 2442 aa14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 C1orf196B1AJZ1 125 aa14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 B9A039 149 aa14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 SLC31A2O15432 143 aa14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 IL6RP08887 468 aaPredicted RBP14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 SELLP14151 372 aa14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 APOBEC3AP31941 199 aaPredicted RBP14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 LINC00205P59089 165 aa14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 RPL31P62899 125 aaKnown RBP14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 LRRC10Q5BKY1 277 aa14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 RAB1CQ92928 201 aa14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 VSIRQ9H7M9 311 aa14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 TMEM106BQ9NUM4 274 aa14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 TCF19Q9Y242 345 aa14.57□□□□□ -0.08
HLA-DQB1-204ENST00000399084 TANC2Q9HCD6 1990 aa14.56□□□□□ -0.08
HLA-DQB1-204ENST00000399084 TMEM250H0YL14 139 aa14.56□□□□□ -0.08
HLA-DQB1-204ENST00000399084 NDUFB3O43676 98 aa14.56□□□□□ -0.08
HLA-DQB1-204ENST00000399084 NDUFB7P17568 137 aa14.56□□□□□ -0.08
HLA-DQB1-204ENST00000399084 PSMB3P49720 205 aa14.56□□□□□ -0.08
HLA-DQB1-204ENST00000399084 FFAR4Q5NUL3 377 aa14.56□□□□□ -0.08
HLA-DQB1-204ENST00000399084 ETV3LQ6ZN32 361 aa14.56□□□□□ -0.08
HLA-DQB1-204ENST00000399084 ZNF383Q8NA42 475 aa14.56□□□□□ -0.08
HLA-DQB1-204ENST00000399084 ZNF714Q96N38 554 aa14.56□□□□□ -0.08
HLA-DQB1-204ENST00000399084 ENY2Q9NPA8 101 aa14.56□□□□□ -0.08
HLA-DQB1-204ENST00000399084 KLF2Q9Y5W3 355 aaPredicted RBP14.56□□□□□ -0.08
HLA-DQB1-204ENST00000399084 DMXL1Q9Y485 3027 aa14.56□□□□□ -0.08
HLA-DQB1-204ENST00000399084 SHISA9B4DS77 424 aa14.55□□□□□ -0.08
HLA-DQB1-204ENST00000399084 SEC14L6B5MCN3 397 aa14.55□□□□□ -0.08
HLA-DQB1-204ENST00000399084 OPRK1P41145 380 aa14.55□□□□□ -0.08
HLA-DQB1-204ENST00000399084 OR4A47Q6IF82 309 aa14.55□□□□□ -0.08
HLA-DQB1-204ENST00000399084 LINC00311Q8N616 119 aa14.55□□□□□ -0.08
HLA-DQB1-204ENST00000399084 OSR1Q8TAX0 266 aaPredicted RBP14.55□□□□□ -0.08
HLA-DQB1-204ENST00000399084 ZNF596Q8TC21 504 aa14.55□□□□□ -0.08
HLA-DQB1-204ENST00000399084 CA5BP1Q8WTZ4 195 aa14.55□□□□□ -0.08
HLA-DQB1-204ENST00000399084 LOC400499M0QZD8 3231 aa14.55□□□□□ -0.08
HLA-DQB1-204ENST00000399084 SMCO3A2RU48 225 aa14.55□□□□□ -0.08
HLA-DQB1-204ENST00000399084 ZFP92A6NM28 416 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 127.1 ms