RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 ZNF841Q6ZN19 808 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 OR9G1Q8NH87 305 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 LHFPL5Q8TAF8 219 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 Q96M66 194 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 CLEC7AQ9BXN2 247 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 PPP1R17O96001 155 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 HKR1P10072 659 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 NUTF2P61970 127 aaKnown RBP4.68□□□□□ -1.66
VPS13C-204ENST00000395898 HERPUD1Q15011 391 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 FHL5Q5TD97 284 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 NPDC1Q9NQX5 325 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-204ENST00000395898 MOB4Q9Y3A3 225 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 SPTA1P02549 2419 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 MUC1P15941 1255 aaPredicted RBP4.68□□□□□ -1.66
VPS13C-204ENST00000395898 AGAP20933 346 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 FADS6Q8N9I5 356 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 IGHV3-21A0A0B4J1V1 117 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 CA2P00918 260 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 IGKV3-11P04433 115 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 ARL14EPLP0DKL9 152 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 FCARP24071 287 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 SMIM8Q96KF7 97 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 TRBV5-7A0A0A0MS05 114 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 NPPCP23582 126 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 SSTR5P35346 364 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 KLRB1Q12918 225 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 UNC119Q13432 240 aa4.68□□□□□ -1.66
VPS13C-204ENST00000395898 CELA2AP08217 269 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 ATP5G2Q06055 141 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 OVCH2Q7RTZ1 564 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 SELENOHQ8IZQ5 122 aaKnown RBP4.67□□□□□ -1.66
VPS13C-204ENST00000395898 RFLNBQ8N5W9 214 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 RAB37Q96AX2 223 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 VSIG10L2P0DP72 767 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 SPINK2P20155 84 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 ZNF137PP52743 207 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 DLX6P56179 175 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 CD300CQ08708 224 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 PAPPA-AS1Q5QFB9 102 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 SAMD13Q5VXD3 122 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 OR52M1Q8NGK5 317 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 KIR2DL4Q99706 377 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 C5orf66Q9H5L9 145 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 SIRT4Q9Y6E7 314 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-204ENST00000395898 TRAV39A0A0B4J263 110 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 CXCL2P19875 107 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 JOSD1Q15040 202 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-204ENST00000395898 PCOLCEQ15113 449 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 COL5A1-AS1Q5SY13 56 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 NRIP2Q9BQI9 281 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 A0A1W2PPE3 182 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 ATXN7O15265 892 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-204ENST00000395898 KCNAB3O43448 404 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 ZNF324O75467 553 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-204ENST00000395898 KBTBD11O94819 623 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 CEACAM1P13688 526 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 UNQ5815/PRO19632Q6UWF5 114 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 FDCSPQ8NFU4 85 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 ZNF502Q8TBZ5 544 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 TICRRQ7Z2Z1 1910 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 COL4A5P29400 1685 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 PLXNA3P51805 1871 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 TMSB15BA0A087X1C1 80 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 GDF9O60383 454 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 P2RY4P51582 365 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 SAPCD1Q5SSQ6 148 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 HCP5Q6MZN7 132 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 FAM159AQ6UWV7 190 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 NEU4Q8WWR8 484 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-204ENST00000395898 SOSTQ9BQB4 213 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 SLC25A17O43808 307 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 AMY1AP04745 511 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 RNFT1Q5M7Z0 435 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 SPSB2Q99619 263 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 ADIPOQQ15848 244 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 CXorf66Q5JRM2 361 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-204ENST00000395898 WDR25Q64LD2 544 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-204ENST00000395898 SLC16A13Q7RTY0 426 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 CENPVQ7Z7K6 275 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-204ENST00000395898 GGACTQ9BVM4 153 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 CNOT1A5YKK6 2376 aaKnown RBP4.67□□□□□ -1.66
VPS13C-204ENST00000395898 ABCA1O95477 2261 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 FAM181BA6NEQ2 426 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 RBFOX2O43251 390 aaKnown RBP eCLIP4.67□□□□□ -1.66
VPS13C-204ENST00000395898 GREM1O60565 184 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 DANCRP0C864 163 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 GPX4P36969 197 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-204ENST00000395898 UQCRFS1P47985 274 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 RPL24P83731 157 aaKnown RBP4.67□□□□□ -1.66
VPS13C-204ENST00000395898 MESP2Q0VG99 397 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 OR4C12Q96R67 309 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 G6PC2Q9NQR9 355 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 FRMPD3Q5JV73 1810 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 ATP5J2P56134 94 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 ZNF383Q8NA42 475 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 CLDND2Q8NHS1 167 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 HIST1H2BAQ96A08 127 aa4.67□□□□□ -1.66
VPS13C-204ENST00000395898 ZNF256Q9Y2P7 627 aaPredicted RBP4.67□□□□□ -1.66
VPS13C-204ENST00000395898 K7ERU9 68 aa4.66□□□□□ -1.66
VPS13C-204ENST00000395898 FOLR2P14207 255 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms