RNA–Protein interactions for RNA: ENST00000378536.4

SKI-201, Transcript of SKI proto-oncogene, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKI, Length 5,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-201ENST00000378536 SPSB4Q96A44 273 aa17.83■□□□□ 0.44
SKI-201ENST00000378536 SMIM8Q96KF7 97 aa17.83■□□□□ 0.44
SKI-201ENST00000378536 RBM14Q96PK6 669 aaKnown RBP17.83■□□□□ 0.44
SKI-201ENST00000378536 NAGKQ9UJ70 344 aa17.83■□□□□ 0.44
SKI-201ENST00000378536 TRAV24A0A0B4J272 114 aa17.83■□□□□ 0.44
SKI-201ENST00000378536 FAM157CP0CG43 387 aa17.83■□□□□ 0.44
SKI-201ENST00000378536 FOXL2NBQ6ZUU3 175 aa17.83■□□□□ 0.44
SKI-201ENST00000378536 GTF3AQ92664 365 aaKnown RBP17.83■□□□□ 0.44
SKI-201ENST00000378536 FAM216AQ8WUB2 273 aa17.83■□□□□ 0.44
SKI-201ENST00000378536 FXYD3Q14802 87 aa17.82■□□□□ 0.44
SKI-201ENST00000378536 TMEM208Q9BTX3 173 aa17.82■□□□□ 0.44
SKI-201ENST00000378536 PAXXQ9BUH6 204 aa17.82■□□□□ 0.44
SKI-201ENST00000378536 RND2P52198 227 aa17.82■□□□□ 0.44
SKI-201ENST00000378536 PAFAH1B2P68402 229 aa17.82■□□□□ 0.44
SKI-201ENST00000378536 ZNF430Q9H8G1 570 aaPredicted RBP17.82■□□□□ 0.44
SKI-201ENST00000378536 TRBV6-7A0A0A0MS04 114 aa17.82■□□□□ 0.44
SKI-201ENST00000378536 LINC00869P0C866 280 aa17.82■□□□□ 0.44
SKI-201ENST00000378536 RABAC1Q9UI14 185 aa17.82■□□□□ 0.44
SKI-201ENST00000378536 RPEL1Q2QD12 228 aa17.82■□□□□ 0.44
SKI-201ENST00000378536 RTBDNQ9BSG5 229 aaPredicted RBP17.81■□□□□ 0.44
SKI-201ENST00000378536 DNAJC13O75165 2243 aa17.81■□□□□ 0.44
SKI-201ENST00000378536 BSXQ3C1V8 233 aa17.81■□□□□ 0.44
SKI-201ENST00000378536 TAF15Q92804 592 aaKnown RBP eCLIP17.81■□□□□ 0.444e-6■■□□□ 12.7
SKI-201ENST00000378536 GALNT14Q96FL9 552 aa17.81■□□□□ 0.44
SKI-201ENST00000378536 MFAP4P55083 255 aa17.81■□□□□ 0.44
SKI-201ENST00000378536 TRAF4Q9BUZ4 470 aaPredicted RBP17.81■□□□□ 0.44
SKI-201ENST00000378536 MED12Q93074 2177 aa17.81■□□□□ 0.44
SKI-201ENST00000378536 NPIPB11E5RHQ5 1161 aa17.81■□□□□ 0.44
SKI-201ENST00000378536 LYNX1G3V0Z9 82 aa17.81■□□□□ 0.44
SKI-201ENST00000378536 LYNX1P0DP58 116 aa17.81■□□□□ 0.44
SKI-201ENST00000378536 PDZD11Q5EBL8 140 aa17.81■□□□□ 0.44
SKI-201ENST00000378536 TMEM218A2RU14 115 aa17.8■□□□□ 0.44
SKI-201ENST00000378536 REG1AP05451 166 aa17.8■□□□□ 0.44
SKI-201ENST00000378536 NTF3P20783 257 aa17.8■□□□□ 0.44
SKI-201ENST00000378536 CCL3L1P16619 93 aa17.8■□□□□ 0.44
SKI-201ENST00000378536 SULT1A2P50226 295 aa17.8■□□□□ 0.44
SKI-201ENST00000378536 KIF26BQ2KJY2 2108 aa17.8■□□□□ 0.44
SKI-201ENST00000378536 NUP37Q8NFH4 326 aa17.8■□□□□ 0.44
SKI-201ENST00000378536 IGKV1-12A0A0C4DH73 117 aa17.8■□□□□ 0.44
SKI-201ENST00000378536 IGKV1D-12P01611 117 aa17.8■□□□□ 0.44
SKI-201ENST00000378536 ZNF474Q6S9Z5 364 aaPredicted RBP17.8■□□□□ 0.44
SKI-201ENST00000378536 ACAA1P09110 424 aaPredicted RBP17.8■□□□□ 0.44
SKI-201ENST00000378536 OR4C12Q96R67 309 aa17.8■□□□□ 0.44
SKI-201ENST00000378536 TRAPPC1Q9Y5R8 145 aa17.8■□□□□ 0.44
SKI-201ENST00000378536 C17orf98A8MV24 154 aa17.8■□□□□ 0.44
SKI-201ENST00000378536 UCP1P25874 307 aa17.8■□□□□ 0.44
SKI-201ENST00000378536 CACNA1HO95180 2353 aa17.79■□□□□ 0.44
SKI-201ENST00000378536 TFF1P04155 84 aa17.79■□□□□ 0.44
SKI-201ENST00000378536 FREM3P0C091 2139 aa17.79■□□□□ 0.44
SKI-201ENST00000378536 DOCK9Q9BZ29 2069 aa17.79■□□□□ 0.44
SKI-201ENST00000378536 A0A0A6YYD4 124 aa17.79■□□□□ 0.44
SKI-201ENST00000378536 SRSF10O75494 262 aaKnown RBP17.79■□□□□ 0.44
SKI-201ENST00000378536 ID1P41134 155 aa17.79■□□□□ 0.44
SKI-201ENST00000378536 TRAV30A0A087WSZ9 112 aa17.79■□□□□ 0.44
SKI-201ENST00000378536 YPEL1O60688 119 aa17.79■□□□□ 0.44
SKI-201ENST00000378536 BATFQ16520 125 aa17.79■□□□□ 0.44
SKI-201ENST00000378536 YPEL2Q96QA6 119 aa17.79■□□□□ 0.44
SKI-201ENST00000378536 SOSTQ9BQB4 213 aa17.79■□□□□ 0.44
SKI-201ENST00000378536 C7orf69Q9H7B7 122 aa17.79■□□□□ 0.44
SKI-201ENST00000378536 HELTA6NFD8 242 aa17.78■□□□□ 0.44
SKI-201ENST00000378536 RD3LP0DJH9 198 aa17.78■□□□□ 0.44
SKI-201ENST00000378536 HIST1H1EP10412 219 aaKnown RBP17.78■□□□□ 0.44
SKI-201ENST00000378536 SPINK4O60575 86 aa17.78■□□□□ 0.44
SKI-201ENST00000378536 FAM74A3Q4VXF1 159 aa17.78■□□□□ 0.44
SKI-201ENST00000378536 PRR30Q53SZ7 412 aaPredicted RBP17.78■□□□□ 0.44
SKI-201ENST00000378536 STPG2Q8N412 459 aa17.78■□□□□ 0.44
SKI-201ENST00000378536 LINC00052Q96N35 136 aa17.78■□□□□ 0.44
SKI-201ENST00000378536 ATP5IP56385 69 aaPredicted RBP17.78■□□□□ 0.44
SKI-201ENST00000378536 WFDC3Q8IUB2 231 aa17.78■□□□□ 0.44
SKI-201ENST00000378536 METTL26Q96S19 204 aa17.78■□□□□ 0.44
SKI-201ENST00000378536 MRPL20Q9BYC9 149 aaKnown RBP17.78■□□□□ 0.44
SKI-201ENST00000378536 IGKV1-27A0A075B6S5 117 aa17.78■□□□□ 0.44
SKI-201ENST00000378536 SLC16A13Q7RTY0 426 aa17.78■□□□□ 0.44
SKI-201ENST00000378536 SRRM5B3KS81 715 aa17.77■□□□□ 0.44
SKI-201ENST00000378536 MIC13Q5XKP0 118 aa17.77■□□□□ 0.44
SKI-201ENST00000378536 IGKV1D-33P01593 117 aa17.77■□□□□ 0.44
SKI-201ENST00000378536 IGKV1-33P01594 117 aa17.77■□□□□ 0.44
SKI-201ENST00000378536 RANP62826 216 aaKnown RBP17.77■□□□□ 0.44
SKI-201ENST00000378536 SIGLECL1Q8N7X8 197 aa17.77■□□□□ 0.44
SKI-201ENST00000378536 SEC11CQ9BY50 192 aa17.77■□□□□ 0.44
SKI-201ENST00000378536 C5orf63A6NC05 138 aa17.77■□□□□ 0.43
SKI-201ENST00000378536 BMPR1BO00238 502 aa17.77■□□□□ 0.43
SKI-201ENST00000378536 ATP5G2Q06055 141 aa17.77■□□□□ 0.43
SKI-201ENST00000378536 MS4A10Q96PG2 267 aa17.77■□□□□ 0.43
SKI-201ENST00000378536 CD8AP01732 235 aa17.77■□□□□ 0.43
SKI-201ENST00000378536 FAM103A1Q9BTL3 118 aaKnown RBP17.77■□□□□ 0.43
SKI-201ENST00000378536 NAT8BQ9UHF3 227 aa17.77■□□□□ 0.43
SKI-201ENST00000378536 TGFAP01135 160 aa17.76■□□□□ 0.43
SKI-201ENST00000378536 AUP1Q9Y679 476 aa17.76■□□□□ 0.43
SKI-201ENST00000378536 SIGLEC5O15389 551 aa17.76■□□□□ 0.43
SKI-201ENST00000378536 OR4A47Q6IF82 309 aa17.76■□□□□ 0.43
SKI-201ENST00000378536 CLRN3Q8NCR9 226 aa17.76■□□□□ 0.43
SKI-201ENST00000378536 ZNF672Q499Z4 452 aaPredicted RBP17.76■□□□□ 0.43
SKI-201ENST00000378536 ZNF660Q6AZW8 331 aaPredicted RBP17.76■□□□□ 0.43
SKI-201ENST00000378536 FAM169BQ8N8A8 192 aa17.76■□□□□ 0.43
SKI-201ENST00000378536 ANAPC16Q96DE5 110 aa17.76■□□□□ 0.43
SKI-201ENST00000378536 A0A1W2PS18 150 aa17.76■□□□□ 0.43
SKI-201ENST00000378536 IGSF23A1L1A6 192 aa17.76■□□□□ 0.43
SKI-201ENST00000378536 LINC00862A6NCI5 91 aa17.76■□□□□ 0.43
SKI-201ENST00000378536 C1QTNF9BB2RNN3 333 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms