RNA–Protein interactions for RNA: ENST00000376854.5

C9orf40-201, Transcript of chromosome 9 open reading frame 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf40, Length 2,327 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40-201ENST00000376854 PRR33A8MZF0 331 aa21■□□□□ 0.95
C9orf40-201ENST00000376854 GATCO43716 136 aaKnown RBP21■□□□□ 0.95
C9orf40-201ENST00000376854 VENTXO95231 258 aa21■□□□□ 0.95
C9orf40-201ENST00000376854 AARDQ4LEZ3 155 aa21■□□□□ 0.95
C9orf40-201ENST00000376854 MORN2Q502X0 79 aa21■□□□□ 0.95
C9orf40-201ENST00000376854 DNLZQ5SXM8 178 aa21■□□□□ 0.95
C9orf40-201ENST00000376854 FAM234AQ9H0X4 552 aa21■□□□□ 0.95
C9orf40-201ENST00000376854 ASCL3Q9NQ33 180 aa21■□□□□ 0.95
C9orf40-201ENST00000376854 IGKV1D-17A0A075B6S4 117 aa20.99■□□□□ 0.95
C9orf40-201ENST00000376854 IFNA10P01566 189 aa20.99■□□□□ 0.95
C9orf40-201ENST00000376854 EDDM3BP56851 147 aa20.99■□□□□ 0.95
C9orf40-201ENST00000376854 MZT1Q08AG7 82 aa20.99■□□□□ 0.95
C9orf40-201ENST00000376854 OR4A16Q8NH70 328 aa20.99■□□□□ 0.95
C9orf40-201ENST00000376854 LAMA5O15230 3695 aa20.99■□□□□ 0.95
C9orf40-201ENST00000376854 M0R1X1 148 aa20.99■□□□□ 0.95
C9orf40-201ENST00000376854 SPCS3P61009 180 aa20.99■□□□□ 0.95
C9orf40-201ENST00000376854 RPP30P78346 268 aaKnown RBP20.99■□□□□ 0.95
C9orf40-201ENST00000376854 GAMTQ14353 236 aa20.99■□□□□ 0.95
C9orf40-201ENST00000376854 SARAFQ96BY9 339 aa20.99■□□□□ 0.95
C9orf40-201ENST00000376854 PLSCR4Q9NRQ2 329 aa20.99■□□□□ 0.95
C9orf40-201ENST00000376854 JPT1Q9UK76 154 aa20.99■□□□□ 0.95
C9orf40-201ENST00000376854 FAM90A9PA6NNJ1 464 aa20.98■□□□□ 0.95
C9orf40-201ENST00000376854 LY86O95711 162 aa20.98■□□□□ 0.95
C9orf40-201ENST00000376854 OR5T1Q8NG75 326 aa20.98■□□□□ 0.95
C9orf40-201ENST00000376854 S100PBPQ96BU1 408 aa20.98■□□□□ 0.95
C9orf40-201ENST00000376854 DUSP13Q9UII6 198 aa20.98■□□□□ 0.95
C9orf40-201ENST00000376854 CNOT1A5YKK6 2376 aaKnown RBP20.98■□□□□ 0.95
C9orf40-201ENST00000376854 A0A1B0GWJ7 208 aa20.98■□□□□ 0.95
C9orf40-201ENST00000376854 FAM3BP58499 235 aaPredicted RBP20.98■□□□□ 0.95
C9orf40-201ENST00000376854 VKORC1L1Q8N0U8 176 aa20.98■□□□□ 0.95
C9orf40-201ENST00000376854 NBEAQ8NFP9 2946 aa20.98■□□□□ 0.95
C9orf40-201ENST00000376854 OR1P1Q8NH06 330 aa20.98■□□□□ 0.95
C9orf40-201ENST00000376854 Q8TCH9 128 aa20.98■□□□□ 0.95
C9orf40-201ENST00000376854 OPN3Q9H1Y3 402 aaPredicted RBP20.98■□□□□ 0.95
C9orf40-201ENST00000376854 A0A1W2PPV4 95 aa20.97■□□□□ 0.95
C9orf40-201ENST00000376854 CRYAAP02489 173 aa20.97■□□□□ 0.95
C9orf40-201ENST00000376854 BMP5P22003 454 aa20.97■□□□□ 0.95
C9orf40-201ENST00000376854 CD82P27701 267 aa20.97■□□□□ 0.95
C9orf40-201ENST00000376854 UBE2G2P60604 165 aa20.97■□□□□ 0.95
C9orf40-201ENST00000376854 RPL39P5Q59GN2 51 aa20.97■□□□□ 0.95
C9orf40-201ENST00000376854 OR2T10Q8NGZ9 312 aa20.97■□□□□ 0.95
C9orf40-201ENST00000376854 SRRM5B3KS81 715 aa20.96■□□□□ 0.95
C9orf40-201ENST00000376854 PDE6DO43924 150 aa20.96■□□□□ 0.95
C9orf40-201ENST00000376854 IGHV3-13P01766 116 aa20.96■□□□□ 0.95
C9orf40-201ENST00000376854 IGHV3-7P01780 117 aa20.96■□□□□ 0.95
C9orf40-201ENST00000376854 DEFA6Q01524 100 aa20.96■□□□□ 0.95
C9orf40-201ENST00000376854 CST9LP1Q5W188 147 aa20.96■□□□□ 0.95
C9orf40-201ENST00000376854 FAM90A1Q86YD7 464 aa20.96■□□□□ 0.95
C9orf40-201ENST00000376854 RAB1CQ92928 201 aa20.96■□□□□ 0.95
C9orf40-201ENST00000376854 HEYLQ9NQ87 328 aaPredicted RBP20.96■□□□□ 0.95
C9orf40-201ENST00000376854 XKRY2A2RUG3 117 aa20.96■□□□□ 0.95
C9orf40-201ENST00000376854 YPEL1O60688 119 aa20.96■□□□□ 0.95
C9orf40-201ENST00000376854 SRP14P37108 136 aaKnown RBP20.96■□□□□ 0.95
C9orf40-201ENST00000376854 ERVK-16P61578 105 aa20.96■□□□□ 0.95
C9orf40-201ENST00000376854 YPEL2Q96QA6 119 aa20.96■□□□□ 0.95
C9orf40-201ENST00000376854 ZNF71Q9NQZ8 489 aaPredicted RBP20.96■□□□□ 0.95
C9orf40-201ENST00000376854 RRHO14718 337 aa20.95■□□□□ 0.94
C9orf40-201ENST00000376854 MGST3O14880 152 aa20.95■□□□□ 0.94
C9orf40-201ENST00000376854 GGCTO75223 188 aaKnown RBP20.95■□□□□ 0.94
C9orf40-201ENST00000376854 MPDU1O75352 247 aa20.95■□□□□ 0.94
C9orf40-201ENST00000376854 ATP5G3P48201 142 aa20.95■□□□□ 0.94
C9orf40-201ENST00000376854 GNB1P62873 340 aa20.95■□□□□ 0.94
C9orf40-201ENST00000376854 P2RY6Q15077 328 aa20.95■□□□□ 0.94
C9orf40-201ENST00000376854 TMEM249Q2WGJ8 235 aa20.95■□□□□ 0.94
C9orf40-201ENST00000376854 PATZ1Q9HBE1 687 aaKnown RBP20.95■□□□□ 0.94
C9orf40-201ENST00000376854 IGHV3OR15-7A0A075B7D8 119 aa20.95■□□□□ 0.94
C9orf40-201ENST00000376854 TRAV17A0A0B4J275 112 aa20.95■□□□□ 0.94
C9orf40-201ENST00000376854 TREML4Q6UXN2 200 aa20.95■□□□□ 0.94
C9orf40-201ENST00000376854 BHLHA15Q7RTS1 189 aaPredicted RBP20.95■□□□□ 0.94
C9orf40-201ENST00000376854 C1orf174Q8IYL3 243 aa20.95■□□□□ 0.94
C9orf40-201ENST00000376854 PPP1R35Q8TAP8 253 aa20.95■□□□□ 0.94
C9orf40-201ENST00000376854 PROCRQ9UNN8 238 aa20.95■□□□□ 0.94
C9orf40-201ENST00000376854 SOX15O60248 233 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 TNFSF13O75888 250 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 CHRNA7P36544 502 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 VDAC2P45880 294 aaPredicted RBP20.94■□□□□ 0.94
C9orf40-201ENST00000376854 ZNF134P52741 427 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 LRP11Q86VZ4 500 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 OR52E5Q8NH55 327 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 TMEM170AQ8WVE7 144 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 PTPRBP23467 1997 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 RBFOX2O43251 390 aaKnown RBP eCLIP20.94■□□□□ 0.94
C9orf40-201ENST00000376854 AMBPP02760 352 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 OPRK1P41145 380 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 LOXL3P58215 753 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 MSMPQ1L6U9 139 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 IGFL2Q6UWQ7 119 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 LINC01551Q86U37 167 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 KCNIP2Q9NS61 270 aa20.94■□□□□ 0.94
C9orf40-201ENST00000376854 TRAV3A0A0B4J244 114 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 RELBQ01201 579 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 CR1LQ2VPA4 569 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 COA6Q5JTJ3 125 aaKnown RBP20.93■□□□□ 0.94
C9orf40-201ENST00000376854 KCNIP4Q6PIL6 250 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 ZNRF1Q8ND25 227 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 FAM216AQ8WUB2 273 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 STARD4Q96DR4 205 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 MEGF10Q96KG7 1140 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 S1PR3Q99500 378 aa20.93■□□□□ 0.94
C9orf40-201ENST00000376854 IFI27L2Q9H2X8 130 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms