RNA–Protein interactions for RNA: ENST00000374879.4

TMEFF1-201, Transcript of transmembrane protein with EGF like and two follistatin like domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEFF1, Length 2,611 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1-201ENST00000374879 FAM90A24PP0C7X0 464 aa17.27■□□□□ 0.35
TMEFF1-201ENST00000374879 DCAF12Q5T6F0 453 aa17.27■□□□□ 0.35
TMEFF1-201ENST00000374879 FAM27BQ5VT28 67 aa17.27■□□□□ 0.35
TMEFF1-201ENST00000374879 FAM58AQ8N1B3 248 aa17.27■□□□□ 0.35
TMEFF1-201ENST00000374879 TMEM136Q6ZRR5 245 aa17.26■□□□□ 0.35
TMEFF1-201ENST00000374879 Q8N7P7 452 aa17.26■□□□□ 0.35
TMEFF1-201ENST00000374879 A0A1W2PPV4 95 aa17.26■□□□□ 0.35
TMEFF1-201ENST00000374879 FAM90A26D6RGX4 464 aa17.26■□□□□ 0.35
TMEFF1-201ENST00000374879 MEGF9Q9H1U4 602 aa17.26■□□□□ 0.35
TMEFF1-201ENST00000374879 METTL7AQ9H8H3 244 aa17.26■□□□□ 0.35
TMEFF1-201ENST00000374879 K7ERU9 68 aa17.25■□□□□ 0.35
TMEFF1-201ENST00000374879 ARL14EPLP0DKL9 152 aa17.25■□□□□ 0.35
TMEFF1-201ENST00000374879 EDDM3BP56851 147 aa17.25■□□□□ 0.35
TMEFF1-201ENST00000374879 FGF12P61328 243 aa17.25■□□□□ 0.35
TMEFF1-201ENST00000374879 Q56UQ5 140 aa17.25■□□□□ 0.35
TMEFF1-201ENST00000374879 WDR74Q6RFH5 385 aaPredicted RBP17.25■□□□□ 0.35
TMEFF1-201ENST00000374879 OR10G3Q8NGC4 313 aa17.25■□□□□ 0.35
TMEFF1-201ENST00000374879 ST6GALNAC6Q969X2 333 aa17.25■□□□□ 0.35
TMEFF1-201ENST00000374879 UCN2Q96RP3 112 aa17.25■□□□□ 0.35
TMEFF1-201ENST00000374879 V9GYV3 84 aa17.25■□□□□ 0.35
TMEFF1-201ENST00000374879 OR4P4Q8NGL7 312 aa17.25■□□□□ 0.35
TMEFF1-201ENST00000374879 ZDHHC16Q969W1 377 aa17.25■□□□□ 0.35
TMEFF1-201ENST00000374879 SMIM12Q96EX1 92 aa17.25■□□□□ 0.35
TMEFF1-201ENST00000374879 KCNS2Q9ULS6 477 aa17.25■□□□□ 0.35
TMEFF1-201ENST00000374879 GAGE12BA1L429 117 aa17.24■□□□□ 0.35
TMEFF1-201ENST00000374879 BMPR1BO00238 502 aa17.24■□□□□ 0.35
TMEFF1-201ENST00000374879 ZG16O60844 167 aa17.24■□□□□ 0.35
TMEFF1-201ENST00000374879 IGFBP4P22692 258 aa17.24■□□□□ 0.35
TMEFF1-201ENST00000374879 ESPL1Q14674 2120 aa17.24■□□□□ 0.35
TMEFF1-201ENST00000374879 PRSS47A8MTI9 375 aa17.24■□□□□ 0.35
TMEFF1-201ENST00000374879 C3orf80F5H4A9 247 aa17.24■□□□□ 0.35
TMEFF1-201ENST00000374879 NPIPA3F8WFD2 350 aa17.24■□□□□ 0.35
TMEFF1-201ENST00000374879 LHFPL4Q7Z7J7 247 aa17.24■□□□□ 0.35
TMEFF1-201ENST00000374879 ZNF439Q8NDP4 499 aa17.24■□□□□ 0.35
TMEFF1-201ENST00000374879 IGLV3-12A0A075B6K2 115 aa17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 H0YJW9 148 aa17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 ZNF32P17041 273 aa17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 RPL31P62899 125 aaKnown RBP17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 FAM69BQ5VUD6 431 aa17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 WASHC3Q9Y3C0 194 aa17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 RRHO14718 337 aa17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 NBEAP1P0C6P0 100 aa17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 RHOBP62745 196 aa17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 VWC2Q2TAL6 325 aa17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 TMEM249Q2WGJ8 235 aa17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 UBALD1Q8TB05 177 aa17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 RAB1CQ92928 201 aa17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 FGF23Q9GZV9 251 aaPredicted RBP17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 LIN7CQ9NUP9 197 aaKnown RBP17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 MTCH1Q9NZJ7 389 aa17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 YTHDF2Q9Y5A9 579 aaKnown RBP17.23■□□□□ 0.35
TMEFF1-201ENST00000374879 ADAMTS20P59510 1910 aa17.22■□□□□ 0.35
TMEFF1-201ENST00000374879 MT-ND6P03923 174 aa17.22■□□□□ 0.35
TMEFF1-201ENST00000374879 TGFBR3Q03167 851 aa17.22■□□□□ 0.35
TMEFF1-201ENST00000374879 SPINK9Q5DT21 86 aa17.22■□□□□ 0.35
TMEFF1-201ENST00000374879 EBLN2Q6P2I7 272 aa17.22■□□□□ 0.35
TMEFF1-201ENST00000374879 WDR73Q6P4I2 378 aa17.22■□□□□ 0.35
TMEFF1-201ENST00000374879 ZNF430Q9H8G1 570 aaPredicted RBP17.22■□□□□ 0.35
TMEFF1-201ENST00000374879 SAP30O75446 220 aa17.22■□□□□ 0.35
TMEFF1-201ENST00000374879 CLDN14O95500 239 aa17.22■□□□□ 0.35
TMEFF1-201ENST00000374879 CX3CL1P78423 397 aa17.22■□□□□ 0.35
TMEFF1-201ENST00000374879 WFDC8Q8IUA0 241 aa17.22■□□□□ 0.35
TMEFF1-201ENST00000374879 RNF138Q8WVD3 245 aa17.22■□□□□ 0.35
TMEFF1-201ENST00000374879 CEP192Q8TEP8 1941 aa17.22■□□□□ 0.35
TMEFF1-201ENST00000374879 LRP5LA4QPB2 252 aa17.21■□□□□ 0.35
TMEFF1-201ENST00000374879 OTX2P32243 289 aa17.21■□□□□ 0.35
TMEFF1-201ENST00000374879 G6PCP35575 357 aa17.21■□□□□ 0.35
TMEFF1-201ENST00000374879 GPM6AP51674 278 aa17.21■□□□□ 0.35
TMEFF1-201ENST00000374879 EAF1Q96JC9 268 aaPredicted RBP17.21■□□□□ 0.35
TMEFF1-201ENST00000374879 DEPPQ9NTK1 212 aa17.21■□□□□ 0.35
TMEFF1-201ENST00000374879 TOX4O94842 621 aa17.21■□□□□ 0.35
TMEFF1-201ENST00000374879 NUDT3O95989 172 aa17.21■□□□□ 0.35
TMEFF1-201ENST00000374879 TCL1AP56279 114 aa17.21■□□□□ 0.35
TMEFF1-201ENST00000374879 CLDN18P56856 261 aa17.21■□□□□ 0.35
TMEFF1-201ENST00000374879 PHF7Q9BWX1 381 aaPredicted RBP17.21■□□□□ 0.35
TMEFF1-201ENST00000374879 HES4Q9HCC6 221 aa17.21■□□□□ 0.35
TMEFF1-201ENST00000374879 CRIM1Q9NZV1 1036 aa17.21■□□□□ 0.35
TMEFF1-201ENST00000374879 C19orf25Q9UFG5 118 aaPredicted RBP17.21■□□□□ 0.35
TMEFF1-201ENST00000374879 CELA3BP08861 270 aa17.2■□□□□ 0.34
TMEFF1-201ENST00000374879 ARF1P84077 181 aaKnown RBP17.2■□□□□ 0.34
TMEFF1-201ENST00000374879 OR52L2PQ8NGH6 319 aa17.2■□□□□ 0.34
TMEFF1-201ENST00000374879 ABHD3Q8WU67 409 aa17.2■□□□□ 0.34
TMEFF1-201ENST00000374879 TXNDC17Q9BRA2 123 aa17.2■□□□□ 0.34
TMEFF1-201ENST00000374879 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP17.2■□□□□ 0.34
TMEFF1-201ENST00000374879 RAMP3O60896 148 aa17.2■□□□□ 0.34
TMEFF1-201ENST00000374879 SPINK2P20155 84 aa17.2■□□□□ 0.34
TMEFF1-201ENST00000374879 COL8A2P25067 703 aa17.2■□□□□ 0.34
TMEFF1-201ENST00000374879 FGFBP3Q8TAT2 258 aa17.2■□□□□ 0.34
TMEFF1-201ENST00000374879 SARAFQ96BY9 339 aa17.2■□□□□ 0.34
TMEFF1-201ENST00000374879 OR2D2Q9H210 308 aa17.2■□□□□ 0.34
TMEFF1-201ENST00000374879 IGLV3-32A0A0A0MS00 114 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 MUC21A0A0G2JKD1 596 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 MUC21A0A140T8X8 626 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 LRRC30A6NM36 301 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 CORTO00230 105 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 ZNHIT1O43257 154 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 SCRG1O75711 98 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 B4GALT1P15291 398 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 TNXAQ16473 311 aa17.19■□□□□ 0.34
TMEFF1-201ENST00000374879 MUC21Q5SSG8 566 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms