RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 FAM53AQ6NSI3 398 aaPredicted RBP11.57□□□□□ -0.56
USF1-202ENST00000368020 C22orf34Q6ZV56 151 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 ZNF709Q8N972 641 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 DDB2Q92466 427 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 RAB39BQ96DA2 213 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 P2RX4Q99571 388 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 GGACTQ9BVM4 153 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 SAP30LQ9HAJ7 183 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 RPS10P5Q9NQ39 176 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 RPRMQ9NS64 109 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 MPDU1O75352 247 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 THBDP07204 575 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 ZNF787Q6DD87 383 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 MS4A5Q9H3V2 200 aa11.57□□□□□ -0.56
USF1-202ENST00000368020 CISD1Q9NZ45 108 aaKnown RBP11.57□□□□□ -0.56
USF1-202ENST00000368020 PMS2P5A8MQ11 134 aa11.56□□□□□ -0.56
USF1-202ENST00000368020 PROP1O75360 226 aa11.56□□□□□ -0.56
USF1-202ENST00000368020 HRASP01112 189 aa11.56□□□□□ -0.56
USF1-202ENST00000368020 GYPAP02724 150 aa11.56□□□□□ -0.56
USF1-202ENST00000368020 CTRB1P17538 263 aa11.56□□□□□ -0.56
USF1-202ENST00000368020 AVPI1Q5T686 147 aa11.56□□□□□ -0.56
USF1-202ENST00000368020 CTRB2Q6GPI1 263 aa11.56□□□□□ -0.56
USF1-202ENST00000368020 RBMS3Q6XE24 437 aaKnown RBP11.56□□□□□ -0.56
USF1-202ENST00000368020 ZNF439Q8NDP4 499 aa11.56□□□□□ -0.56
USF1-202ENST00000368020 SMG1Q96Q15 3661 aaKnown RBP11.56□□□□□ -0.56
USF1-202ENST00000368020 CCL13Q99616 98 aa11.56□□□□□ -0.56
USF1-202ENST00000368020 RPUSD1Q9UJJ7 312 aaKnown RBP11.56□□□□□ -0.56
USF1-202ENST00000368020 LOC102723971A0A1B0GUV8 181 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 A0A1B0GV50 99 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 C7orf77A4D0Y5 90 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 ARG1P05089 322 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 SRP19P09132 144 aaKnown RBP11.55□□□□□ -0.56
USF1-202ENST00000368020 OR13C7P0DN81 318 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 BCL2P10415 239 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 FOLR2P14207 255 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 DAOP14920 347 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 NFYBP25208 207 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 ZNF134P52741 427 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 CCL20P78556 96 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 CCL8P80075 99 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 MRPS11P82912 194 aaKnown RBP11.55□□□□□ -0.56
USF1-202ENST00000368020 ICAM4Q14773 271 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 POU2AF1Q16633 256 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 HAGHQ16775 308 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 RPL39P5Q59GN2 51 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 CT45A1Q5HYN5 189 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 FAM201AQ5SY85 155 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 CT45A3Q8NHU0 189 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 RCC1LQ96I51 464 aaKnown RBP11.55□□□□□ -0.56
USF1-202ENST00000368020 RARRES2Q99969 163 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 NIPSNAP3BQ9BS92 247 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 QTRT1Q9BXR0 403 aaKnown RBP11.55□□□□□ -0.56
USF1-202ENST00000368020 KCNIP2Q9NS61 270 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 SLC25A10Q9UBX3 287 aaPredicted RBP11.55□□□□□ -0.56
USF1-202ENST00000368020 RFNGQ9Y644 331 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 ANKHD1Q8IWZ3 2542 aaKnown RBP11.55□□□□□ -0.56
USF1-202ENST00000368020 PPIAL4EA0A075B759 164 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 SAA2-SAA4A0A096LPE2 208 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 PPIAL4DF5H284 164 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 TMPRSS2O15393 492 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 NDUFA2O43678 99 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 MT-ND4LP03901 98 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 OR9G9P0C7N8 305 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 SAA2P0DJI9 122 aaPredicted RBP11.55□□□□□ -0.56
USF1-202ENST00000368020 PPIAL4FP0DN26 164 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 FGF7P21781 194 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 RAB11AP62491 216 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 RTL8BQ17RB0 113 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 RNF212Q495C1 297 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 SLC25A48Q6ZT89 311 aaKnown RBP11.55□□□□□ -0.56
USF1-202ENST00000368020 SLC35E3Q7Z769 313 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 DEFB108BQ8NET1 73 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 CA5BP1Q8WTZ4 195 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 ZDHHC16Q969W1 377 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 SLC39A9Q9NUM3 307 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 TMEM140Q9NV12 185 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 PPIAL4AQ9Y536 164 aa11.55□□□□□ -0.56
USF1-202ENST00000368020 A0A087WWC5 75 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 CTXND1A0A1B0GTU2 59 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 MAP1LC3B2A6NCE7 125 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 C15orf61A6NNL5 157 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 B4DEV8 164 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 TMEM178BH3BS89 294 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 SNRNP70P08621 437 aaKnown RBP11.54□□□□□ -0.56
USF1-202ENST00000368020 SELLP14151 372 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 ATP5IP56385 69 aaPredicted RBP11.54□□□□□ -0.56
USF1-202ENST00000368020 OR2B8PP59922 312 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 RELBQ01201 579 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 PNRC1Q12796 327 aaPredicted RBP11.54□□□□□ -0.56
USF1-202ENST00000368020 EFNB3Q15768 340 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 NCMAPQ5T1S8 102 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 FAM216BQ8N7L0 139 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 MAP1LC3BQ9GZQ8 125 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 VAX2Q9UIW0 290 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 FOXA2Q9Y261 457 aaPredicted RBP11.54□□□□□ -0.56
USF1-202ENST00000368020 DOCK11Q5JSL3 2073 aa11.54□□□□□ -0.56
USF1-202ENST00000368020 DOPEY1Q5JWR5 2465 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 MEX3AA1L020 520 aaKnown RBP11.53□□□□□ -0.56
USF1-202ENST00000368020 C15orf62A8K5M9 175 aa11.53□□□□□ -0.56
USF1-202ENST00000368020 NDUFB7P17568 137 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms