RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 CALYQ9NYX4 217 aa8.67□□□□□ -1.02
SMPD4-201ENST00000351288 IGKV3-15P01624 115 aa8.67□□□□□ -1.02
SMPD4-201ENST00000351288 PAX6P26367 422 aa8.67□□□□□ -1.02
SMPD4-201ENST00000351288 ZNF880Q6PDB4 577 aa8.67□□□□□ -1.02
SMPD4-201ENST00000351288 ZNF497Q6ZNH5 498 aa8.67□□□□□ -1.02
SMPD4-201ENST00000351288 SEM1Q6ZVN7 128 aa8.67□□□□□ -1.02
SMPD4-201ENST00000351288 MOB3BQ86TA1 216 aa8.67□□□□□ -1.02
SMPD4-201ENST00000351288 NAV2Q8IVL1 2488 aa8.67□□□□□ -1.02
SMPD4-201ENST00000351288 TANC2Q9HCD6 1990 aa8.67□□□□□ -1.02
SMPD4-201ENST00000351288 MARCH11A6NNE9 402 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 SRP19P09132 144 aaKnown RBP8.66□□□□□ -1.02
SMPD4-201ENST00000351288 ZNF726P1Q15940 193 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 GNPNAT1Q96EK6 184 aaPredicted RBP8.66□□□□□ -1.02
SMPD4-201ENST00000351288 C5orf30Q96GV9 206 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 RAB40CQ96S21 281 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 SFXN3Q9BWM7 321 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 OR6C3Q9NZP0 311 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 DOK5Q9P104 306 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 ONECUT1Q9UBC0 465 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 CYB5BO43169 146 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 MT-ND4LP03901 98 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 SLC25A6P12236 298 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 GFI1BQ5VTD9 330 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 C15orf54Q8N8G6 183 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 Q8NFD4 153 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 COL27A1Q8IZC6 1860 aaPredicted RBP8.66□□□□□ -1.02
SMPD4-201ENST00000351288 MSMPQ1L6U9 139 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 LRRC10Q5BKY1 277 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 FFAR4Q5NUL3 377 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 FAM90A1Q86YD7 464 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 OR4F5Q8NH21 305 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 Q8WTZ3 238 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 OR4F4Q96R69 305 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 RBKSQ9H477 322 aa8.66□□□□□ -1.02
SMPD4-201ENST00000351288 PPIAL4EA0A075B759 164 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 PPIAL4DF5H284 164 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 PPIAL4FP0DN26 164 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 PRB4P10163 310 aaPredicted RBP8.65□□□□□ -1.02
SMPD4-201ENST00000351288 MYOD1P15172 320 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 TAS2R30P59541 319 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 SSTP61278 116 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 WDR25Q64LD2 544 aaPredicted RBP8.65□□□□□ -1.02
SMPD4-201ENST00000351288 CDPF1Q6NVV7 123 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 WFIKKN1Q96NZ8 548 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 COMMD5Q9GZQ3 224 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 SLC35D1Q9NTN3 355 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 LAMP3Q9UQV4 416 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 PPIAL4AQ9Y536 164 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 PLAUP00749 431 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 IGKV1D-33P01593 117 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 IGKV1-33P01594 117 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 IGHV1-46P01743 117 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 GCSAMLQ5JQS6 135 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 LINC00596Q86U02 117 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 ZNF645Q8N7E2 425 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 NIPSNAP3BQ9BS92 247 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 KMT2EQ8IZD2 1858 aa8.65□□□□□ -1.02
SMPD4-201ENST00000351288 hADV38S2A0JD32 116 aa8.65□□□□□ -1.03
SMPD4-201ENST00000351288 TOX4O94842 621 aa8.65□□□□□ -1.03
SMPD4-201ENST00000351288 GRNP28799 593 aaKnown RBP8.65□□□□□ -1.03
SMPD4-201ENST00000351288 RAB5CP51148 216 aa8.65□□□□□ -1.03
SMPD4-201ENST00000351288 CLDND2Q8NHS1 167 aa8.65□□□□□ -1.03
SMPD4-201ENST00000351288 PLEKHA3Q9HB20 300 aa8.65□□□□□ -1.03
SMPD4-201ENST00000351288 IGKV1D-17A0A075B6S4 117 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 TRAV38-1A0A0B4J264 116 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 A0A1B0GU03 582 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.64□□□□□ -1.03
SMPD4-201ENST00000351288 DPRXA6NFQ7 191 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 LINC00473A8K010 186 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 SLC31A2O15432 143 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 APOA2P02652 100 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 TFF3Q07654 80 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 RTP5Q14D33 572 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 RCC1LQ96I51 464 aaKnown RBP8.64□□□□□ -1.03
SMPD4-201ENST00000351288 QTRT1Q9BXR0 403 aaKnown RBP8.64□□□□□ -1.03
SMPD4-201ENST00000351288 NAV3Q8IVL0 2385 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 MAP1LC3B2A6NCE7 125 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 MBD3L4A6NDZ8 208 aaPredicted RBP8.64□□□□□ -1.03
SMPD4-201ENST00000351288 MBD3L3A6NE82 208 aaPredicted RBP8.64□□□□□ -1.03
SMPD4-201ENST00000351288 MBD3L5A6NJ08 208 aaPredicted RBP8.64□□□□□ -1.03
SMPD4-201ENST00000351288 TRGC2P03986 189 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 HSPB1P04792 205 aaKnown RBP8.64□□□□□ -1.03
SMPD4-201ENST00000351288 TMPRSS3P57727 454 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 ZNF561Q8N587 486 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 ZNF525Q8N782 197 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 MBD3L2Q8NHZ7 208 aaPredicted RBP8.64□□□□□ -1.03
SMPD4-201ENST00000351288 SNX22Q96L94 193 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 MAP1LC3BQ9GZQ8 125 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 SIRT7Q9NRC8 400 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 DSCAMO60469 2012 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 CNIH1O95406 144 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 IFNA1P01562 189 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 HOXB1P14653 301 aaPredicted RBP8.64□□□□□ -1.03
SMPD4-201ENST00000351288 CD200P41217 278 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 KIAA1456Q9P272 454 aa8.64□□□□□ -1.03
SMPD4-201ENST00000351288 WNK1Q9H4A3 2382 aa8.63□□□□□ -1.03
SMPD4-201ENST00000351288 C5orf52A6NGY3 159 aa8.63□□□□□ -1.03
SMPD4-201ENST00000351288 LINC00587B1AMM8 73 aa8.63□□□□□ -1.03
SMPD4-201ENST00000351288 REG1AP05451 166 aa8.63□□□□□ -1.03
SMPD4-201ENST00000351288 S100A9P06702 114 aaKnown RBP8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 111.3 ms