RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 SHOXO15266 292 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 CXCL3P19876 107 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 BCAP31P51572 246 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 NMSQ5H8A3 153 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 GGNBP1Q5YKI7 109 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 CLEC9AQ6UXN8 241 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 Q8N6K4 173 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 CHAC2Q8WUX2 184 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 EAF1Q96JC9 268 aaPredicted RBP21.69■■□□□ 1.06
SSBP4-202ENST00000348495 HARBI1Q96MB7 349 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 A0A0G2JRQ6 117 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 MDFIC2A0A1B0GVS7 189 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 HMX3A6NHT5 357 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 ATG12O94817 140 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 MOSP00540 346 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 HRASP01112 189 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 IGLV2-23P01705 113 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 HNF1AP20823 631 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 VKORC1L1Q8N0U8 176 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 OR2T10Q8NGZ9 312 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 RHOVQ96L33 236 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 PRDM13Q9H4Q3 707 aa21.69■■□□□ 1.06
SSBP4-202ENST00000348495 MXRA5Q9NR99 2828 aa21.68■■□□□ 1.06
SSBP4-202ENST00000348495 CCSO14618 274 aa21.68■■□□□ 1.06
SSBP4-202ENST00000348495 FAM106CPP0CH98 169 aa21.68■■□□□ 1.06
SSBP4-202ENST00000348495 LGALS7P47929 136 aa21.68■■□□□ 1.06
SSBP4-202ENST00000348495 RPS16P62249 146 aaKnown RBP21.68■■□□□ 1.06
SSBP4-202ENST00000348495 LRRC75BQ2VPJ9 315 aa21.68■■□□□ 1.06
SSBP4-202ENST00000348495 OR5M8Q8NGP6 311 aa21.68■■□□□ 1.06
SSBP4-202ENST00000348495 MGAT4CQ9UBM8 478 aa21.68■■□□□ 1.06
SSBP4-202ENST00000348495 MPTX1A8MV57 137 aa21.67■■□□□ 1.06
SSBP4-202ENST00000348495 GOSR2O14653 212 aa21.67■■□□□ 1.06
SSBP4-202ENST00000348495 TRAPPC2P0DI81 140 aa21.67■■□□□ 1.06
SSBP4-202ENST00000348495 TRAPPC2BP0DI82 140 aa21.67■■□□□ 1.06
SSBP4-202ENST00000348495 SRP14P37108 136 aaKnown RBP21.67■■□□□ 1.06
SSBP4-202ENST00000348495 AKR1C2P52895 323 aa21.67■■□□□ 1.06
SSBP4-202ENST00000348495 ZNF48Q96MX3 618 aaPredicted RBP21.67■■□□□ 1.06
SSBP4-202ENST00000348495 SSX3Q99909 188 aa21.67■■□□□ 1.06
SSBP4-202ENST00000348495 MMP24Q9Y5R2 645 aa21.67■■□□□ 1.06
SSBP4-202ENST00000348495 AIFM2Q9BRQ8 373 aa21.66■■□□□ 1.06
SSBP4-202ENST00000348495 GSX1Q9H4S2 264 aaPredicted RBP21.66■■□□□ 1.06
SSBP4-202ENST00000348495 IFNA21P01568 189 aa21.66■■□□□ 1.06
SSBP4-202ENST00000348495 IL6RP08887 468 aaPredicted RBP21.66■■□□□ 1.06
SSBP4-202ENST00000348495 H2BFSP57053 126 aa21.66■■□□□ 1.06
SSBP4-202ENST00000348495 ERVK-16P61578 105 aa21.66■■□□□ 1.06
SSBP4-202ENST00000348495 OR4A47Q6IF82 309 aa21.66■■□□□ 1.06
SSBP4-202ENST00000348495 FAM219AQ8IW50 185 aa21.66■■□□□ 1.06
SSBP4-202ENST00000348495 GPR146Q96CH1 333 aa21.66■■□□□ 1.06
SSBP4-202ENST00000348495 RRNAD1Q96FB5 475 aaKnown RBP21.66■■□□□ 1.06
SSBP4-202ENST00000348495 HIVEP2P31629 2446 aa21.65■■□□□ 1.06
SSBP4-202ENST00000348495 CNTFRP26992 372 aa21.65■■□□□ 1.06
SSBP4-202ENST00000348495 HES1Q14469 280 aa21.65■■□□□ 1.06
SSBP4-202ENST00000348495 SSX9Q7RTT3 188 aa21.65■■□□□ 1.06
SSBP4-202ENST00000348495 PUSL1Q8N0Z8 303 aaKnown RBP21.65■■□□□ 1.06
SSBP4-202ENST00000348495 DMBX1Q8NFW5 382 aa21.65■■□□□ 1.06
SSBP4-202ENST00000348495 OR10C1Q96KK4 312 aa21.65■■□□□ 1.06
SSBP4-202ENST00000348495 TMEM140Q9NV12 185 aa21.65■■□□□ 1.06
SSBP4-202ENST00000348495 SIX6O95475 246 aa21.64■■□□□ 1.06
SSBP4-202ENST00000348495 SAA1P0DJI8 122 aaPredicted RBP21.64■■□□□ 1.06
SSBP4-202ENST00000348495 UBE2KP61086 200 aa21.64■■□□□ 1.06
SSBP4-202ENST00000348495 HNF4GQ14541 408 aa21.64■■□□□ 1.06
SSBP4-202ENST00000348495 IZUMO4Q1ZYL8 232 aa21.64■■□□□ 1.06
SSBP4-202ENST00000348495 Q6ZRM9 215 aa21.64■■□□□ 1.06
SSBP4-202ENST00000348495 TSNAXQ99598 290 aaKnown RBP21.64■■□□□ 1.06
SSBP4-202ENST00000348495 ANK3Q12955 4377 aaKnown RBP21.64■■□□□ 1.05
SSBP4-202ENST00000348495 PSG5Q15238 335 aa21.63■■□□□ 1.05
SSBP4-202ENST00000348495 H2BFWTQ7Z2G1 175 aa21.63■■□□□ 1.05
SSBP4-202ENST00000348495 NPBQ8NG41 125 aa21.63■■□□□ 1.05
SSBP4-202ENST00000348495 RNASE11Q8TAA1 199 aaKnown RBP21.63■■□□□ 1.05
SSBP4-202ENST00000348495 PLSCR3Q9NRY6 295 aa21.63■■□□□ 1.05
SSBP4-202ENST00000348495 CRYGBP07316 175 aa21.63■■□□□ 1.05
SSBP4-202ENST00000348495 SLC25A6P12236 298 aa21.63■■□□□ 1.05
SSBP4-202ENST00000348495 TMEM11P17152 192 aa21.63■■□□□ 1.05
SSBP4-202ENST00000348495 F2RL1P55085 397 aa21.63■■□□□ 1.05
SSBP4-202ENST00000348495 Q6YL49 198 aa21.63■■□□□ 1.05
SSBP4-202ENST00000348495 BET1LQ9NYM9 111 aa21.63■■□□□ 1.05
SSBP4-202ENST00000348495 F8P00451 2351 aa21.62■■□□□ 1.05
SSBP4-202ENST00000348495 H3BUX3 64 aa21.62■■□□□ 1.05
SSBP4-202ENST00000348495 SPDEFO95238 335 aa21.62■■□□□ 1.05
SSBP4-202ENST00000348495 IER3P46695 156 aa21.62■■□□□ 1.05
SSBP4-202ENST00000348495 GSG1LQ6UXU4 331 aa21.62■■□□□ 1.05
SSBP4-202ENST00000348495 CDC42EP3Q9UKI2 254 aa21.62■■□□□ 1.05
SSBP4-202ENST00000348495 C13orf42A0A1B0GVH6 325 aa21.61■■□□□ 1.05
SSBP4-202ENST00000348495 C5orf51A6NDU8 294 aa21.61■■□□□ 1.05
SSBP4-202ENST00000348495 FAM25EA8MYX2 175 aa21.61■■□□□ 1.05
SSBP4-202ENST00000348495 SLC25A17O43808 307 aa21.61■■□□□ 1.05
SSBP4-202ENST00000348495 OR2A4O95047 310 aa21.61■■□□□ 1.05
SSBP4-202ENST00000348495 NDUFA3O95167 84 aa21.61■■□□□ 1.05
SSBP4-202ENST00000348495 OR9G9P0C7N8 305 aa21.61■■□□□ 1.05
SSBP4-202ENST00000348495 SRSF4Q08170 494 aaKnown RBP21.61■■□□□ 1.05
SSBP4-202ENST00000348495 VMA21Q3ZAQ7 101 aa21.61■■□□□ 1.05
SSBP4-202ENST00000348495 OR2A7Q96R45 310 aa21.61■■□□□ 1.05
SSBP4-202ENST00000348495 TCF19Q9Y242 345 aa21.61■■□□□ 1.05
SSBP4-202ENST00000348495 A0A1B0GU03 582 aa21.6■■□□□ 1.05
SSBP4-202ENST00000348495 NBR2O15453 112 aa21.6■■□□□ 1.05
SSBP4-202ENST00000348495 MMDQ15546 238 aa21.6■■□□□ 1.05
SSBP4-202ENST00000348495 IAH1Q2TAA2 248 aaPredicted RBP21.6■■□□□ 1.05
SSBP4-202ENST00000348495 Q71RC1 249 aaPredicted RBP21.6■■□□□ 1.05
SSBP4-202ENST00000348495 TEX45Q8NA69 505 aa21.6■■□□□ 1.05
SSBP4-202ENST00000348495 OR8H1Q8NGG4 311 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms