RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 LYSMD2Q8IV50 215 aa15.03■□□□□ -0
SYNE4-202ENST00000340477 OR5M8Q8NGP6 311 aa15.03■□□□□ -0
SYNE4-202ENST00000340477 OR52I2Q8NH67 350 aa15.03■□□□□ -0
SYNE4-202ENST00000340477 PHB2Q99623 299 aa15.03■□□□□ -0
SYNE4-202ENST00000340477 FAM103A1Q9BTL3 118 aaKnown RBP15.03■□□□□ -0
SYNE4-202ENST00000340477 PLXNB1O43157 2135 aa15.02■□□□□ -0
SYNE4-202ENST00000340477 GABARAPH6UMI1 98 aa15.02■□□□□ -0
SYNE4-202ENST00000340477 CRYGBP07316 175 aa15.02■□□□□ -0
SYNE4-202ENST00000340477 SAA1P0DJI8 122 aaPredicted RBP15.02■□□□□ -0
SYNE4-202ENST00000340477 CDX1P47902 265 aaPredicted RBP15.02■□□□□ -0
SYNE4-202ENST00000340477 SSBP1Q04837 148 aaKnown RBP15.02■□□□□ -0
SYNE4-202ENST00000340477 VAX1Q5SQQ9 334 aa15.02■□□□□ -0
SYNE4-202ENST00000340477 C8orf86Q6ZUL3 223 aa15.02■□□□□ -0
SYNE4-202ENST00000340477 SPAG16Q8N0X2 631 aa15.02■□□□□ -0
SYNE4-202ENST00000340477 MINDY2Q8NBR6 621 aa15.02■□□□□ -0
SYNE4-202ENST00000340477 LFNGQ8NES3 379 aa15.02■□□□□ -0
SYNE4-202ENST00000340477 OR51H1Q8NH63 302 aa15.02■□□□□ -0
SYNE4-202ENST00000340477 CD300LFQ8TDQ1 290 aa15.02■□□□□ -0
SYNE4-202ENST00000340477 ABHD1Q96SE0 405 aa15.02■□□□□ -0
SYNE4-202ENST00000340477 FXYD6Q9H0Q3 95 aa15.02■□□□□ -0
SYNE4-202ENST00000340477 MTFP1Q9UDX5 166 aa15.02■□□□□ -0
SYNE4-202ENST00000340477 FBXO7Q9Y3I1 522 aa15.02■□□□□ -0
SYNE4-202ENST00000340477 SRRM4A7MD48 611 aaKnown RBP15.01□□□□□ -0.01
SYNE4-202ENST00000340477 GPR31O00270 319 aa15.01□□□□□ -0.01
SYNE4-202ENST00000340477 RBFOX2O43251 390 aaKnown RBP eCLIP15.01□□□□□ -0.01
SYNE4-202ENST00000340477 IGLV1-40P01703 118 aa15.01□□□□□ -0.01
SYNE4-202ENST00000340477 TAS2R19P59542 299 aa15.01□□□□□ -0.01
SYNE4-202ENST00000340477 TNXAQ16473 311 aa15.01□□□□□ -0.01
SYNE4-202ENST00000340477 PRSS8Q16651 343 aa15.01□□□□□ -0.01
SYNE4-202ENST00000340477 IDO2Q6ZQW0 420 aa15.01□□□□□ -0.01
SYNE4-202ENST00000340477 LCNL1Q6ZST4 164 aa15.01□□□□□ -0.01
SYNE4-202ENST00000340477 MMD2Q8IY49 270 aa15.01□□□□□ -0.01
SYNE4-202ENST00000340477 TMEM68Q96MH6 324 aa15.01□□□□□ -0.01
SYNE4-202ENST00000340477 SLIRPQ9GZT3 109 aaKnown RBP15.01□□□□□ -0.01
SYNE4-202ENST00000340477 NUBP2Q9Y5Y2 271 aa15.01□□□□□ -0.01
SYNE4-202ENST00000340477 M0QYG6 137 aa15□□□□□ -0.01
SYNE4-202ENST00000340477 ZNF701M0R085 212 aaPredicted RBP15□□□□□ -0.01
SYNE4-202ENST00000340477 MPPED1O15442 326 aa15□□□□□ -0.01
SYNE4-202ENST00000340477 RLN1P04808 185 aa15□□□□□ -0.01
SYNE4-202ENST00000340477 GNRHRP30968 328 aa15□□□□□ -0.01
SYNE4-202ENST00000340477 PJVKQ0ZLH3 352 aa15□□□□□ -0.01
SYNE4-202ENST00000340477 ARRDC1Q8N5I2 433 aa15□□□□□ -0.01
SYNE4-202ENST00000340477 C4orf3Q8WVX3 66 aa15□□□□□ -0.01
SYNE4-202ENST00000340477 GPHA2Q96T91 129 aa15□□□□□ -0.01
SYNE4-202ENST00000340477 KLK11Q9UBX7 282 aa15□□□□□ -0.01
SYNE4-202ENST00000340477 VSIG4Q9Y279 399 aa15□□□□□ -0.01
SYNE4-202ENST00000340477 CMYA5Q8N3K9 4069 aa15□□□□□ -0.01
SYNE4-202ENST00000340477 ARPC1BO15143 372 aaKnown RBP14.99□□□□□ -0.01
SYNE4-202ENST00000340477 OR2A4O95047 310 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 HPRT1P00492 218 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 S100A5P33763 92 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 MYCNOSP40205 109 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 RAB9AP51151 201 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 DGCR2P98153 550 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 C18orf65Q6ZTR6 163 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 SLC38A6Q8IZM9 456 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 TMEM229BQ8NBD8 167 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 SMIM4Q8WVI0 70 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 RHOVQ96L33 236 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 UBE2E2Q96LR5 201 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 OR2A7Q96R45 310 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 SLA2Q9H6Q3 261 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 ZNF355PQ9NSJ1 428 aa14.99□□□□□ -0.01
SYNE4-202ENST00000340477 CTDSPLO15194 276 aa14.98□□□□□ -0.01
SYNE4-202ENST00000340477 KBTBD11O94819 623 aa14.98□□□□□ -0.01
SYNE4-202ENST00000340477 CD3DP04234 171 aa14.98□□□□□ -0.01
SYNE4-202ENST00000340477 EGR2P11161 476 aaPredicted RBP14.98□□□□□ -0.01
SYNE4-202ENST00000340477 NQO2P16083 231 aa14.98□□□□□ -0.01
SYNE4-202ENST00000340477 TAS2R31P59538 309 aa14.98□□□□□ -0.01
SYNE4-202ENST00000340477 ERVK-16P61578 105 aa14.98□□□□□ -0.01
SYNE4-202ENST00000340477 C19orf54Q5BKX5 351 aa14.98□□□□□ -0.01
SYNE4-202ENST00000340477 VKORC1L1Q8N0U8 176 aa14.98□□□□□ -0.01
SYNE4-202ENST00000340477 SRSF12Q8WXF0 261 aaKnown RBP14.98□□□□□ -0.01
SYNE4-202ENST00000340477 ZNF430Q9H8G1 570 aaPredicted RBP14.98□□□□□ -0.01
SYNE4-202ENST00000340477 H3BUA1 57 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 CCL24O00175 119 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 RAMP3O60896 148 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 DUS4LO95620 317 aaKnown RBP14.97□□□□□ -0.01
SYNE4-202ENST00000340477 RAB3DO95716 219 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 PGAM2P15259 253 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 MAS1LP35410 378 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 UCP3P55916 312 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 RAB25P57735 213 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 TPPP2P59282 170 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 MEF2DQ14814 521 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 SSX9Q7RTT3 188 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 ZNF491Q8N8L2 437 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 OR4A5Q8NH83 315 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 MYOZ3Q8TDC0 251 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 RCC1LQ96I51 464 aaKnown RBP14.97□□□□□ -0.01
SYNE4-202ENST00000340477 SPIN2AQ99865 258 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 SPIN2BQ9BPZ2 258 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 GPR61Q9BZJ8 451 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 NXF2Q9GZY0 626 aaKnown RBP14.97□□□□□ -0.01
SYNE4-202ENST00000340477 RBM38Q9H0Z9 239 aaKnown RBP14.97□□□□□ -0.01
SYNE4-202ENST00000340477 KLK15Q9H2R5 256 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 PLEKHA2Q9HB19 425 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 HRASLSQ9HDD0 168 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 COMMD9Q9P000 198 aa14.97□□□□□ -0.01
SYNE4-202ENST00000340477 FABP12A6NFH5 140 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms