RNA–Protein interactions for RNA: ENST00000338508.8

SHANK2-201, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 7,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-201ENST00000338508 ICAM4Q14773 271 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 STHQ8IWL8 128 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 FAM89BQ8N5H3 189 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 OR10AG1Q8NH19 301 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 TUBD1Q9UJT1 453 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 TGIF2-C20orf24A0A0A6YYL0 155 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 CDS2O95674 445 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 CLEC19AQ6UXS0 136 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 DEFB104AQ8WTQ1 72 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 MBD3L1Q8WWY6 194 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 CENPVL1A0A0U1RR11 272 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 A0A0U1RRA0 63 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 BCL2P10415 239 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 ZNF385CQ66K41 422 aaPredicted RBP10.11□□□□□ -0.79
SHANK2-201ENST00000338508 TCF24Q7RTU0 167 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 KCNK7Q9Y2U2 307 aa10.11□□□□□ -0.79
SHANK2-201ENST00000338508 LIPFP07098 398 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 GALP22466 123 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 SCAND1P57086 179 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 FGF12P61328 243 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 SURF2Q15527 256 aaPredicted RBP10.1□□□□□ -0.79
SHANK2-201ENST00000338508 LIMS2Q7Z4I7 341 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 FGFRL1Q8N441 504 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 CLEC7AQ9BXN2 247 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 WNT10AQ9GZT5 417 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 LILRA6Q6PI73 481 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 GCSAMQ8N6F7 178 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 NPIPB3Q92617 1050 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 FOXA2Q9Y261 457 aaPredicted RBP10.1□□□□□ -0.79
SHANK2-201ENST00000338508 NPIPB11E5RHQ5 1161 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 TNFSF10P50591 281 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 OR10S1Q8NGN2 331 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 DOCK9Q9BZ29 2069 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 C1QTNF9BB2RNN3 333 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 RPS11P62280 158 aaKnown RBP eCLIP10.1□□□□□ -0.79
SHANK2-201ENST00000338508 ERASQ7Z444 233 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 OR51G1Q8NGK1 321 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 MARS2Q96GW9 593 aaKnown RBP10.1□□□□□ -0.79
SHANK2-201ENST00000338508 TRAV24A0A0B4J272 114 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 IGKV1D-33P01593 117 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 IGKV1-33P01594 117 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 EGR1P18146 543 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 FAM71F2Q6NXP2 309 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 SMRP1Q8NCR6 262 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 ZNRF1Q8ND25 227 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 WDFY2Q96P53 400 aa10.1□□□□□ -0.79
SHANK2-201ENST00000338508 ODAMA1E959 279 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 SLC25A20O43772 301 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 IGKV1D-16P01601 117 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 GPR183P32249 361 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 GLIPR1P48060 266 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 SELENOTP62341 195 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 SPRED2Q7Z698 418 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 ST6GALNAC6Q969X2 333 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 SH3BGRL3Q9H299 93 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 PEBP1P30086 187 aaKnown RBP10.09□□□□□ -0.79
SHANK2-201ENST00000338508 KCNS1Q96KK3 526 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 TJP1Q07157 1748 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 LINC00862A6NCI5 91 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 CDK2AP2O75956 126 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 FOLR2P14207 255 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 H1FOOQ8IZA3 346 aaPredicted RBP10.09□□□□□ -0.79
SHANK2-201ENST00000338508 KLF14Q8TD94 323 aaPredicted RBP10.09□□□□□ -0.79
SHANK2-201ENST00000338508 PDCD11Q14690 1871 aaKnown RBP10.09□□□□□ -0.79
SHANK2-201ENST00000338508 A0A1W2PQM1 296 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 ZNF250P15622 560 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 MUC1P15941 1255 aaPredicted RBP10.09□□□□□ -0.79
SHANK2-201ENST00000338508 PHLDA1Q8WV24 401 aaPredicted RBP10.09□□□□□ -0.79
SHANK2-201ENST00000338508 FOXH1O75593 365 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 SMIM13P0DJ93 91 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 TMEM106BQ9NUM4 274 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 SEMA5BQ9P283 1151 aa10.09□□□□□ -0.79
SHANK2-201ENST00000338508 TRAV30A0A087WSZ9 112 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 LHX2P50458 406 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 FOXA3P55318 350 aaPredicted RBP10.08□□□□□ -0.8
SHANK2-201ENST00000338508 HOGA1Q86XE5 327 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 FAM168AQ92567 244 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 RBMY1BA6NDE4 496 aaKnown RBP10.08□□□□□ -0.8
SHANK2-201ENST00000338508 RBMY1EA6NEQ0 496 aaKnown RBP10.08□□□□□ -0.8
SHANK2-201ENST00000338508 RBMY1DP0C7P1 496 aaKnown RBP10.08□□□□□ -0.8
SHANK2-201ENST00000338508 RBMY1A1P0DJD3 496 aaKnown RBP10.08□□□□□ -0.8
SHANK2-201ENST00000338508 RBMY1CP0DJD4 496 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 HBBP68871 147 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 WDR54Q9H977 334 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 PGLYRP1O75594 196 aaPredicted RBP10.08□□□□□ -0.8
SHANK2-201ENST00000338508 FAM201AQ5SY85 155 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 OR4X2Q8NGF9 303 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 C7orf69Q9H7B7 122 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 ALS2Q96Q42 1657 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 HLA-DRB1P01911 266 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 RPS20P60866 119 aaKnown RBP10.08□□□□□ -0.8
SHANK2-201ENST00000338508 CHD5Q8TDI0 1954 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 CTDSPLO15194 276 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 RIPPLY3P57055 190 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 P2RY6Q15077 328 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 SCGB3A1Q96QR1 104 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 KCNE5Q9UJ90 142 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 IGHV3-64A0A075B6Q5 118 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 CXorf65A6NEN9 183 aa10.08□□□□□ -0.8
SHANK2-201ENST00000338508 H0Y980 276 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms